Curated BLAST for Genomes


Curated BLAST

Searching in Dechlorosoma suillum PS (PS)

Found 46 curated entries in PaperBLAST's database that match '' as complete word(s).

These curated entries have 39 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Dechlorosoma suillum PS, or try another query

Dsui_0801: transcriptional regulator/sugar kinase
is similar to:

MAK_ECOLI / P23917: Fructokinase; D-fructose kinase; Manno(fructo)kinase; EC from Escherichia coli
Mak / b0394: fructokinase (EC; EC from Escherichia coli
mak / P23917: fructokinase (EC; EC from Escherichia coli

55% id,
99% cov

Ga0059261_1776: Fructokinase (EC from Sphingomonas koreensis

31% id,
85% cov

Dsui_1952: D-heptose-7- phosphate 1-kinase
is similar to:

AO356_00035: Fructokinase (EC from Pseudomonas fluorescens

27% id,
97% cov

Pf6N2E2_1965: Fructokinase (EC from Pseudomonas fluorescens

25% id,
97% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory