Curated BLAST for Genomes


Curated BLAST

Searching in Dechlorosoma suillum PS (PS)

Found 9 curated entries in PaperBLAST's database that match '' as complete word(s).

These curated entries have 8 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Dechlorosoma suillum PS, or try another query

Dsui_0801: transcriptional regulator/sugar kinase
is similar to:

Mak / b0394: fructokinase (EC; EC from Escherichia coli
mak / P23917: fructokinase (EC; EC from Escherichia coli

55% id,
99% cov

SMc03109: Mannokinase (EC from Sinorhizobium meliloti

49% id,
99% cov

rokA / Q5GBH5: glucokinase / N-acetylglucosamine kinase / mannokinase (EC; EC; EC from Bacteroides fragilis

31% id,
80% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory