Curated BLAST for Genomes

 

Curated BLAST

Searching in Dechlorosoma suillum PS (PS)

Found 78 curated entries in PaperBLAST's database that match '2.7.2.1'.

These curated entries have 52 distinct sequences.

Running ublast with E ≤ 0.01

Found 7 relevant proteins in Dechlorosoma suillum PS, or try another query

Dsui_1003: phosphoribosylglycinamide formyltransferase 2
is similar to:
PaperBLAST

PurT / b1849: phosphoribosylglycinamide formyltransferase 2 (EC 2.7.2.15; EC 2.7.2.1) from Escherichia coli
purT / P33221: phosphoribosylglycinamide formyltransferase 2 (EC 6.3.1.21; EC 2.7.2.15) from Escherichia coli

63% id,
98% cov

Dsui_0166: glutamate 5-kinase
is similar to:
PaperBLAST

PROB_ECOLI / P0A7B5: Glutamate 5-kinase; Gamma-glutamyl kinase; GK; EC 2.7.2.11 from Escherichia coli
ProB / b0242: glutamate 5-kinase (EC 2.7.2.11) from Escherichia coli
proB: glutamate 5-kinase; EC 2.7.2.11 from Escherichia coli
proB / P0A7B5: glutamate 5-kinase (EC 2.7.2.11) from Escherichia coli
P0A7B5: glutamate 5-kinase (EC 2.7.2.11) from Escherichia coli

46% id,
99% cov

Ga0059261_3512: glutamate 5-kinase (EC 2.7.2.11) from Sphingomonas koreensis

42% id,
98% cov

Q6E235: glutamate 5-kinase (EC 2.7.2.11) from Bacillus subtilis

42% id,
98% cov

More...

Dsui_3033: acetate kinase
is similar to:
PaperBLAST

Q3IYF1: fatty acid kinase (EC 2.7.2.18) from Cereibacter sphaeroides

48% id,
94% cov

G4T0C7: acetate kinase (EC 2.7.2.1) from Methylotuvimicrobium alcaliphilum

41% id,
97% cov

B2RK02: acetate kinase (EC 2.7.2.1) from Porphyromonas gingivalis

40% id,
99% cov

More...

Dsui_1309: acetylglutamate kinase
is similar to:
PaperBLAST

LYSZ_THET2 / O50147: [LysW]-aminoadipate kinase; EC 2.7.2.17 from Thermus thermophilus

32% id,
100% cov

lysZ / Q5SH27: [LysW]-L-2-aminoadipate 6-kinase monomer (EC 2.7.2.17) from Thermus thermophilus

32% id,
100% cov

Dsui_0091: phosphoribosylaminoimidazole carboxylase, PurK protein
is similar to:
PaperBLAST

PurT / b1849: phosphoribosylglycinamide formyltransferase 2 (EC 2.7.2.15; EC 2.7.2.1) from Escherichia coli
purT / P33221: phosphoribosylglycinamide formyltransferase 2 (EC 6.3.1.21; EC 2.7.2.15) from Escherichia coli

28% id,
98% cov

Dsui_1220: gamma-glutamyl phosphate reductase
is similar to:
PaperBLAST

P5CS1_ORYSJ / O04226: Delta-1-pyrroline-5-carboxylate synthase 1; OsP5CS1; EC 2.7.2.11; EC 1.2.1.41 from Oryza sativa

37% id,
56% cov

P5CS1 / P54887: δ1-pyrroline-5-carboxylate synthetase (EC 1.2.1.41; EC 2.7.2.11) from Arabidopsis thaliana

36% id,
56% cov

P5CS2_ORYSJ / Q941T1: Delta-1-pyrroline-5-carboxylate synthase 2; OsP5CS2; EC 2.7.2.11; EC 1.2.1.41 from Oryza sativa

35% id,
54% cov

More...

Dsui_2134: aspartate kinase, monofunctional class
is similar to:
PaperBLAST

Q6E235: glutamate 5-kinase (EC 2.7.2.11) from Bacillus subtilis

25% id,
69% cov

PROB_YEAST / P32264: Glutamate 5-kinase; GK; Gamma-glutamyl kinase; EC 2.7.2.11 from Saccharomyces cerevisiae
P32264: glutamate 5-kinase (EC 2.7.2.11) from Saccharomyces cerevisiae

22% id,
66% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 7 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory