Curated BLAST for Genomes

 

Curated BLAST

Searching in Dechlorosoma suillum PS (PS)

Found 163 curated entries in PaperBLAST's database that match '3.5.3.1'.

These curated entries have 116 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Dechlorosoma suillum PS, or try another query

Dsui_0671: arginase family hydrolase, arginase/agmainase/formiminoglutamate hydrolase
is similar to:
PaperBLAST

A4IJM8: arginase (EC 3.5.3.1) from Geobacillus thermodenitrificans

38% id,
99% cov

ARGI_BACCD / P53608: Arginase; EC 3.5.3.1 from Bacillus caldovelox
P53608: arginase (EC 3.5.3.1) from [Bacillus] caldovelox

37% id,
99% cov

ARGI_BACSU / P39138: Arginase; EC 3.5.3.1 from Bacillus subtilis
argI / P39138: arginase (EC 3.5.3.1) from Bacillus subtilis
P39138: arginase (EC 3.5.3.1) from Bacillus subtilis

34% id,
99% cov

More...

Dsui_1936: cytosine deaminase-like metal-dependent hydrolase
is similar to:
PaperBLAST

HUTF_PSEAE / Q9HU77: Formimidoylglutamate deiminase; Formiminoglutamate deiminase; N-formimino-L-glutamate deiminase; N-formimino-L-glutamate iminohydrolase; EC 3.5.3.13 from Pseudomonas aeruginosa
Q9HU77: formimidoylglutamate deiminase (EC 3.5.3.13); formimidoylglutamase (EC 3.5.3.8) from Pseudomonas aeruginosa

26% id,
94% cov

Pf6N2E2_3808: Formiminoglutamic iminohydrolase (EC 3.5.3.13) from Pseudomonas fluorescens

25% id,
94% cov

Pf1N1B4_1591: Formiminoglutamic iminohydrolase (EC 3.5.3.13) from Pseudomonas fluorescens

27% id,
86% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory