Curated BLAST for Genomes

 

Curated BLAST

Searching in Dechlorosoma suillum PS (PS)

Found 20 curated entries in PaperBLAST's database that match '3.5.3.11' as complete word(s).

These curated entries have 15 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Dechlorosoma suillum PS, or try another query

Dsui_0671: arginase family hydrolase, arginase/agmainase/formiminoglutamate hydrolase
is similar to:
PaperBLAST

AGMT_PYRHO / O57839: Agmatinase; EC 3.5.3.11 from Pyrococcus horikoshii

28% id,
86% cov

SPEBH_THEKO / Q5JI38: N(1)-aminopropylagmatine ureohydrolase; Agmatinase; Protein SpeB homolog; EC 3.5.3.24; EC 3.5.3.11 from Thermococcus kodakarensis

27% id,
90% cov

ARGI1_ARATH / P46637: Arginase 1, mitochondrial; Agmatinase ARGAH1; Arginine amidohydrolase 1; AtARGAH1; EC 3.5.3.1; EC 3.5.3.11 from Arabidopsis thaliana

32% id,
62% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory