Curated BLAST for Genomes

 

Curated BLAST

Searching in Dechlorosoma suillum PS (PS)

Found 12 curated entries in PaperBLAST's database that match '4.2.1.43' as complete word(s).

These curated entries have 11 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Dechlorosoma suillum PS, or try another query

Dsui_1977: dihydrodipicolinate synthase
is similar to:
PaperBLAST

BPHYT_RS22715: L-2-keto-3-deoxyarabonate dehydratase (EC 4.2.1.43) from Burkholderia phytofirmans

28% id,
93% cov

Ac3H11_603: L-2-keto-3-deoxyarabonate dehydratase (EC 4.2.1.43) from Acidovorax sp.

27% id,
93% cov

HSERO_RS06870: L-2-keto-3-deoxyarabonate dehydratase (EC 4.2.1.43) from Herbaspirillum seropedicae

26% id,
94% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory