Curated BLAST for Genomes

 

Curated BLAST

Searching in Dechlorosoma suillum PS (PS)

Found 41 curated entries in PaperBLAST's database that match '4.3.3.7' as complete word(s).

These curated entries have 30 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Dechlorosoma suillum PS, or try another query

Dsui_1977: dihydrodipicolinate synthase
is similar to:
PaperBLAST

DAPA_PSEAE / Q9I4W3: 4-hydroxy-tetrahydrodipicolinate synthase; HTPA synthase; EC 4.3.3.7 from Pseudomonas aeruginosa
Q9I4W3: 4-hydroxy-tetrahydrodipicolinate synthase (EC 4.3.3.7) from Pseudomonas aeruginosa

66% id,
100% cov

DAPA_ECOLI / P0A6L2: 4-hydroxy-tetrahydrodipicolinate synthase; HTPA synthase; EC 4.3.3.7 from Escherichia coli
DapA / b2478: 4-hydroxy-tetrahydrodipicolinate synthase (EC 4.3.3.7) from Escherichia coli
dapA / P0A6L2: 4-hydroxy-tetrahydrodipicolinate synthase (EC 4.3.3.7) from Escherichia coli
P0A6L2: 4-hydroxy-tetrahydrodipicolinate synthase (EC 4.3.3.7) from Escherichia coli

55% id,
100% cov

DAPA_NEIMB / Q9JZR4: 4-hydroxy-tetrahydrodipicolinate synthase; HTPA synthase; EC 4.3.3.7 from Neisseria meningitidis
Q9JZR4: 4-hydroxy-tetrahydrodipicolinate synthase (EC 4.3.3.7) from Neisseria meningitidis

55% id,
100% cov

More...

Dsui_3066: dihydrodipicolinate reductase
is similar to:
PaperBLAST

Q3MFY8: 4-hydroxy-tetrahydrodipicolinate synthase (EC 4.3.3.7) from Trichormus variabilis

28% id,
99% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory