Curated BLAST for Genomes


Curated BLAST

Searching in Dechlorosoma suillum PS (PS)

Found 11 curated entries in PaperBLAST's database that match '' as complete word(s).

These curated entries have 9 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Dechlorosoma suillum PS, or try another query

Dsui_0512: hypothetical protein
is similar to:

Dsui_0512: Methylmalonyl-CoA epimerase (EC from Dechlorosoma suillum

100% id,
100% cov

Dsui_1204: lactoylglutathione lyase
is similar to:

Msed_0639 / A4YEG2: methylmalonyl-CoA epimerase monomer (EC from Metallosphaera sedula
A4YEG2: methylmalonyl-CoA epimerase (EC from Metallosphaera sedula

28% id,
94% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory