Curated BLAST for Genomes

 

Curated BLAST

Searching in Dechlorosoma suillum PS (PS)

Found 21 curated entries in PaperBLAST's database that match '6.3.4.5' as complete word(s).

These curated entries have 16 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Dechlorosoma suillum PS, or try another query

Dsui_3248: argininosuccinate synthase
is similar to:
PaperBLAST

ASSY_THET8 / P59846: Argininosuccinate synthase; Citrulline--aspartate ligase; EC 6.3.4.5 from Thermus thermophilus

64% id,
99% cov

ASSY_THEMA / Q9X2A1: Argininosuccinate synthase; Citrulline--aspartate ligase; EC 6.3.4.5 from Thermotoga maritima

48% id,
99% cov

H9BG20: argininosuccinate synthase (EC 6.3.4.5) from Leishmania donovani

49% id,
95% cov

More...

Dsui_3336: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
is similar to:
PaperBLAST

S4V5K7: argininosuccinate synthase (EC 6.3.4.5) from Protopterus annectens

44% id,
10% cov

ASSY_RAT / P09034: Argininosuccinate synthase; Citrulline--aspartate ligase; EC 6.3.4.5 from Rattus norvegicus

38% id,
11% cov

ASSY_HUMAN / P00966: Argininosuccinate synthase; Citrulline--aspartate ligase; EC 6.3.4.5 from Homo sapiens
ASS1 / P00966: Argininosuccinate synthase (EC 6.3.4.5) from Homo sapiens
P00966: argininosuccinate synthase (EC 6.3.4.5) from Homo sapiens

38% id,
11% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory