Curated BLAST for Genomes

 

Curated BLAST

Searching in Dechlorosoma suillum PS (PS)

Found 2 curated entries in PaperBLAST's database that match 'acetohydroxybutanoate synthase, regulatory subunit' as complete word(s).

These curated entries have 1 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Dechlorosoma suillum PS, or try another query

Dsui_3528: acetolactate synthase, small subunit
is similar to:
PaperBLAST

BrnP / b0078: acetolactate synthase / acetohydroxybutanoate synthase, regulatory subunit (EC 2.2.1.6) from Escherichia coli
ilvH / P00894: acetolactate synthase / acetohydroxybutanoate synthase, regulatory subunit (EC 2.2.1.6) from Escherichia coli

62% id,
100% cov

Dsui_1926: acetolactate synthase, small (regulatory) subunit
is similar to:
PaperBLAST

BrnP / b0078: acetolactate synthase / acetohydroxybutanoate synthase, regulatory subunit (EC 2.2.1.6) from Escherichia coli
ilvH / P00894: acetolactate synthase / acetohydroxybutanoate synthase, regulatory subunit (EC 2.2.1.6) from Escherichia coli

39% id,
47% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory