Searching in Shewanella loihica PV-4 (PV4)
Found 23 curated entries in PaperBLAST's database that match '1.1.1.103' as complete word(s).
These curated entries have 17 distinct sequences.
Running ublast with E ≤ 0.01
Found 6 relevant proteins in Shewanella loihica PV-4, or try another query
| Shew_3710: L-threonine 3-dehydrogenase (RefSeq) is similar to: | PaperBLAST |
TDH_ECOLI / P07913: L-threonine 3-dehydrogenase; TDH; L-threonine dehydrogenase; EC 1.1.1.103 from Escherichia coli | 87% id, 100% cov |
PGA1_c34320: L-threonine 3-dehydrogenase (EC 1.1.1.103) from Phaeobacter inhibens | 61% id, 100% cov |
O31776: L-threonine 3-dehydrogenase (EC 1.1.1.103) from Bacillus subtilis | 46% id, 98% cov |
| Shew_1166: iron-containing alcohol dehydrogenase (RefSeq) is similar to: | PaperBLAST |
YiaY / b3589: L-threonine dehydrogenase (EC 1.1.1.103) from Escherichia coli | 68% id, 99% cov |
| Shew_1910: bifunctional acetaldehyde-CoA/alcohol dehydrogenase (RefSeq) is similar to: | PaperBLAST |
YiaY / b3589: L-threonine dehydrogenase (EC 1.1.1.103) from Escherichia coli | 35% id, 98% cov |
| Shew_1540: alcohol dehydrogenase (RefSeq) is similar to: | PaperBLAST |
TDH_PYRFU / Q8U259: L-threonine 3-dehydrogenase; TDH; L-threonine dehydrogenase; EC 1.1.1.103 from Pyrococcus furiosus | 29% id, 99% cov |
TDH_PYRHO / O58389: L-threonine 3-dehydrogenase; L-ThrDH; TDH; L-threonine dehydrogenase; EC 1.1.1.103 from Pyrococcus horikoshii | 29% id, 99% cov |
TDH_THEKO / Q5JI69: L-threonine 3-dehydrogenase; TDH; L-threonine dehydrogenase; EC 1.1.1.103 from Thermococcus kodakarensis | 28% id, 98% cov |
| Shew_3048: alcohol dehydrogenase (RefSeq) is similar to: | PaperBLAST |
TDH_ECOLI / P07913: L-threonine 3-dehydrogenase; TDH; L-threonine dehydrogenase; EC 1.1.1.103 from Escherichia coli | 29% id, 50% cov |
| Shew_3274: alcohol dehydrogenase (RefSeq) is similar to: | PaperBLAST |
PGA1_c34320: L-threonine 3-dehydrogenase (EC 1.1.1.103) from Phaeobacter inhibens | 33% id, 25% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 5 reading frames. These were all redundant with annotated proteins.
Lawrence Berkeley National Laboratory