Curated BLAST for Genomes

 

Curated BLAST

Searching in Shewanella loihica PV-4 (PV4)

Found 27 curated entries in PaperBLAST's database that match '1.1.1.14' as complete word(s).

These curated entries have 24 distinct sequences.

Running ublast with E ≤ 0.01

Found 18 relevant proteins in Shewanella loihica PV-4, or try another query

Shew_1603: 3-oxoacyl-(acyl-carrier-protein) reductase (RefSeq)
is similar to:
PaperBLAST

Q1J2J0: L-iditol 2-dehydrogenase (EC 1.1.1.14) from Deinococcus geothermalis

39% id,
95% cov

Q5FNX9: L-iditol 2-dehydrogenase (EC 1.1.1.14) from Gluconobacter oxydans

38% id,
97% cov

PGA1_c13170: Sorbitol dehydrogenase (EC 1.1.1.14) from Phaeobacter inhibens

34% id,
98% cov

More...

Shew_2862: short chain dehydrogenase (RefSeq)
is similar to:
PaperBLAST

Q1J2J0: L-iditol 2-dehydrogenase (EC 1.1.1.14) from Deinococcus geothermalis

38% id,
95% cov

Q5FNX9: L-iditol 2-dehydrogenase (EC 1.1.1.14) from Gluconobacter oxydans

33% id,
97% cov

PS417_11520: Sorbitol dehydrogenase (EC 1.1.1.14) from Pseudomonas simiae

33% id,
97% cov

More...

Shew_1407: short-chain dehydrogenase/reductase SDR (RefSeq)
is similar to:
PaperBLAST

BPHYT_RS16120: sorbitol dehydrogenase, D-fructose forming (EC 1.1.1.14) from Burkholderia phytofirmans

35% id,
97% cov

SDH_CERSP / Q59787: Sorbitol dehydrogenase; SDH; Galactitol 2-dehydrogenase; L-iditol 2-dehydrogenase; Polyol dehydrogenase; EC 1.1.1.-; EC 1.1.1.16; EC 1.1.1.14 from Cereibacter sphaeroides
polS / GI|2338763: L-iditol 2-dehydrogenase; EC 1.1.1.14 from Rhodobacter sphaeroides

31% id,
98% cov

PGA1_c13170: Sorbitol dehydrogenase (EC 1.1.1.14) from Phaeobacter inhibens

31% id,
97% cov

More...

Shew_2863: short-chain dehydrogenase/reductase SDR (RefSeq)
is similar to:
PaperBLAST

BPHYT_RS16120: sorbitol dehydrogenase, D-fructose forming (EC 1.1.1.14) from Burkholderia phytofirmans

34% id,
98% cov

Pf6N2E2_1959: D-sorbitol dehydrogenase (EC 1.1.1.14) from Pseudomonas fluorescens

32% id,
98% cov

PS417_11520: Sorbitol dehydrogenase (EC 1.1.1.14) from Pseudomonas simiae

32% id,
98% cov

More...

Shew_1673: 3-ketoacyl-(acyl-carrier-protein) reductase (RefSeq)
is similar to:
PaperBLAST

Q5FNX9: L-iditol 2-dehydrogenase (EC 1.1.1.14) from Gluconobacter oxydans

34% id,
98% cov

Q1J2J0: L-iditol 2-dehydrogenase (EC 1.1.1.14) from Deinococcus geothermalis

34% id,
94% cov

BPHYT_RS16120: sorbitol dehydrogenase, D-fructose forming (EC 1.1.1.14) from Burkholderia phytofirmans

30% id,
97% cov

More...

Shew_3525: 3-ketoacyl-(acyl-carrier-protein) reductase (RefSeq)
is similar to:
PaperBLAST

PS417_11520: Sorbitol dehydrogenase (EC 1.1.1.14) from Pseudomonas simiae

33% id,
96% cov

Pf6N2E2_1959: D-sorbitol dehydrogenase (EC 1.1.1.14) from Pseudomonas fluorescens

32% id,
96% cov

PGA1_c13170: Sorbitol dehydrogenase (EC 1.1.1.14) from Phaeobacter inhibens

32% id,
97% cov

More...

Shew_1326: short-chain dehydrogenase/reductase SDR (RefSeq)
is similar to:
PaperBLAST

Q1J2J0: L-iditol 2-dehydrogenase (EC 1.1.1.14) from Deinococcus geothermalis

33% id,
93% cov

Q5FNX9: L-iditol 2-dehydrogenase (EC 1.1.1.14) from Gluconobacter oxydans

30% id,
99% cov

BPHYT_RS16120: sorbitol dehydrogenase, D-fructose forming (EC 1.1.1.14) from Burkholderia phytofirmans

27% id,
96% cov

More...

Shew_1959: short chain dehydrogenase (RefSeq)
is similar to:
PaperBLAST

Q1J2J0: L-iditol 2-dehydrogenase (EC 1.1.1.14) from Deinococcus geothermalis

32% id,
95% cov

Q5FNX9: L-iditol 2-dehydrogenase (EC 1.1.1.14) from Gluconobacter oxydans

32% id,
95% cov

Shew_1332: short-chain dehydrogenase/reductase SDR (RefSeq)
is similar to:
PaperBLAST

BPHYT_RS16120: sorbitol dehydrogenase, D-fructose forming (EC 1.1.1.14) from Burkholderia phytofirmans

31% id,
97% cov

Pf6N2E2_1959: D-sorbitol dehydrogenase (EC 1.1.1.14) from Pseudomonas fluorescens

29% id,
97% cov

PGA1_c13170: Sorbitol dehydrogenase (EC 1.1.1.14) from Phaeobacter inhibens

29% id,
97% cov

More...

Shew_1322: short-chain dehydrogenase/reductase SDR (RefSeq)
is similar to:
PaperBLAST

Q5FNX9: L-iditol 2-dehydrogenase (EC 1.1.1.14) from Gluconobacter oxydans

31% id,
94% cov

PGA1_c13170: Sorbitol dehydrogenase (EC 1.1.1.14) from Phaeobacter inhibens

26% id,
96% cov

Q1J2J0: L-iditol 2-dehydrogenase (EC 1.1.1.14) from Deinococcus geothermalis

38% id,
64% cov

More...

Shew_3710: L-threonine 3-dehydrogenase (RefSeq)
is similar to:
PaperBLAST

Q5I6M3: L-iditol 2-dehydrogenase (EC 1.1.1.14) from Malus domestica

30% id,
97% cov

DHSO_BACSU / Q06004: Sorbitol dehydrogenase; SDH; Glucitol dehydrogenase; L-iditol 2-dehydrogenase; Polyol dehydrogenase; Xylitol dehydrogenase; EC 1.1.1.-; EC 1.1.1.14; EC 1.1.1.9 from Bacillus subtilis
gutB / GI|304153: L-iditol 2-dehydrogenase; EC 1.1.1.14 from Bacillus subtilis
gutB / Q06004: glucitol dehydrogenase monomer (EC 1.1.1.9; EC 1.1.1.14) from Bacillus subtilis

33% id,
88% cov

Q3C2L6: L-iditol 2-dehydrogenase (EC 1.1.1.14) from Solanum lycopersicum

31% id,
92% cov

More...

Shew_1540: alcohol dehydrogenase (RefSeq)
is similar to:
PaperBLAST

DHSO_BACSU / Q06004: Sorbitol dehydrogenase; SDH; Glucitol dehydrogenase; L-iditol 2-dehydrogenase; Polyol dehydrogenase; Xylitol dehydrogenase; EC 1.1.1.-; EC 1.1.1.14; EC 1.1.1.9 from Bacillus subtilis
gutB / GI|304153: L-iditol 2-dehydrogenase; EC 1.1.1.14 from Bacillus subtilis
gutB / Q06004: glucitol dehydrogenase monomer (EC 1.1.1.9; EC 1.1.1.14) from Bacillus subtilis

28% id,
97% cov

xdh1 / Q876R2: D-sorbitol dehydrogenase (EC 1.1.1.14; EC 1.1.1.9) from Hypocrea jecorina

28% id,
93% cov

Q5I6M4: L-iditol 2-dehydrogenase (EC 1.1.1.14) from Malus domestica

27% id,
94% cov

More...

Shew_3415: short chain dehydrogenase (RefSeq)
is similar to:
PaperBLAST

PS417_11520: Sorbitol dehydrogenase (EC 1.1.1.14) from Pseudomonas simiae

30% id,
84% cov

PGA1_c13170: Sorbitol dehydrogenase (EC 1.1.1.14) from Phaeobacter inhibens

30% id,
81% cov

SDH_CERSP / Q59787: Sorbitol dehydrogenase; SDH; Galactitol 2-dehydrogenase; L-iditol 2-dehydrogenase; Polyol dehydrogenase; EC 1.1.1.-; EC 1.1.1.16; EC 1.1.1.14 from Cereibacter sphaeroides
polS / GI|2338763: L-iditol 2-dehydrogenase; EC 1.1.1.14 from Rhodobacter sphaeroides

29% id,
82% cov

More...

Shew_2557: short-chain dehydrogenase/reductase SDR (RefSeq)
is similar to:
PaperBLAST

Q5FNX9: L-iditol 2-dehydrogenase (EC 1.1.1.14) from Gluconobacter oxydans

32% id,
76% cov

SDH_CERSP / Q59787: Sorbitol dehydrogenase; SDH; Galactitol 2-dehydrogenase; L-iditol 2-dehydrogenase; Polyol dehydrogenase; EC 1.1.1.-; EC 1.1.1.16; EC 1.1.1.14 from Cereibacter sphaeroides
polS / GI|2338763: L-iditol 2-dehydrogenase; EC 1.1.1.14 from Rhodobacter sphaeroides

29% id,
71% cov

Ac3H11_2940: D-sorbitol 2-dehydrogenase (EC 1.1.1.14) from Acidovorax sp.

27% id,
76% cov

More...

Shew_3048: alcohol dehydrogenase (RefSeq)
is similar to:
PaperBLAST

DHSO_BACSU / Q06004: Sorbitol dehydrogenase; SDH; Glucitol dehydrogenase; L-iditol 2-dehydrogenase; Polyol dehydrogenase; Xylitol dehydrogenase; EC 1.1.1.-; EC 1.1.1.14; EC 1.1.1.9 from Bacillus subtilis
gutB / GI|304153: L-iditol 2-dehydrogenase; EC 1.1.1.14 from Bacillus subtilis
gutB / Q06004: glucitol dehydrogenase monomer (EC 1.1.1.9; EC 1.1.1.14) from Bacillus subtilis

31% id,
71% cov

HSERO_RS17015: sorbitol dehydrogenase (EC 1.1.1.14); xylitol dehydrogenase (EC 1.1.1.9) from Herbaspirillum seropedicae

49% id,
18% cov

Shew_3274: alcohol dehydrogenase (RefSeq)
is similar to:
PaperBLAST

HSERO_RS17015: sorbitol dehydrogenase (EC 1.1.1.14); xylitol dehydrogenase (EC 1.1.1.9) from Herbaspirillum seropedicae

24% id,
86% cov

Shew_1481: short-chain dehydrogenase/reductase SDR (RefSeq)
is similar to:
PaperBLAST

Q5FNX9: L-iditol 2-dehydrogenase (EC 1.1.1.14) from Gluconobacter oxydans

28% id,
73% cov

BPHYT_RS16120: sorbitol dehydrogenase, D-fructose forming (EC 1.1.1.14) from Burkholderia phytofirmans

27% id,
70% cov

Shew_0706: short-chain dehydrogenase/reductase SDR (RefSeq)
is similar to:
PaperBLAST

BPHYT_RS16120: sorbitol dehydrogenase, D-fructose forming (EC 1.1.1.14) from Burkholderia phytofirmans

25% id,
72% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 16 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory