Searching in Shewanella loihica PV-4 (PV4)
Found 76 curated entries in PaperBLAST's database that match '1.1.1.27' as complete word(s).
These curated entries have 63 distinct sequences.
Running ublast with E ≤ 0.01
Found 8 relevant proteins in Shewanella loihica PV-4, or try another query
| Shew_1910: bifunctional acetaldehyde-CoA/alcohol dehydrogenase (RefSeq) is similar to: | PaperBLAST |
I3VSF1: alcohol dehydrogenase (EC 1.1.1.1); L-lactate dehydrogenase (EC 1.1.1.27); acetaldehyde dehydrogenase (acetylating) (EC 1.2.1.10) from Thermoanaerobacterium saccharolyticum | 49% id, 99% cov |
| Shew_3004: hypothetical protein (RefSeq) is similar to: | PaperBLAST |
lutA / O07020: iron-sulfur oxidase subunit used in L-lactate utilization (EC 1.1.1.27) from Bacillus subtilis | 37% id, 100% cov |
Q5F885: L-lactate dehydrogenase (subunit 3/3) (EC 1.1.1.27) from Neisseria gonorrhoeae | 29% id, 90% cov |
| Shew_3005: 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein (RefSeq) is similar to: | PaperBLAST |
Q5F883: L-lactate dehydrogenase (subunit 1/3) (EC 1.1.1.27) from Neisseria gonorrhoeae | 38% id, 95% cov |
lutB / O07021: component of an iron-sulfur oxidase linked to L-lactate utilization (EC 1.1.1.27) from Bacillus subtilis | 39% id, 90% cov |
| Shew_0867: malate dehydrogenase (RefSeq) is similar to: | PaperBLAST |
P90613: L-lactate dehydrogenase (EC 1.1.1.27) from Toxoplasma gondii | 30% id, 94% cov |
LDH_LACLN / D8KFT1: L-lactate dehydrogenase; L-LDH; EC 1.1.1.27 from Lactococcus lactis | 28% id, 98% cov |
E7CXT1: L-lactate dehydrogenase (EC 1.1.1.27) from Thermoanaerobacterium saccharolyticum | 26% id, 98% cov |
| Shew_1166: iron-containing alcohol dehydrogenase (RefSeq) is similar to: | PaperBLAST |
I3VSF1: alcohol dehydrogenase (EC 1.1.1.1); L-lactate dehydrogenase (EC 1.1.1.27); acetaldehyde dehydrogenase (acetylating) (EC 1.2.1.10) from Thermoanaerobacterium saccharolyticum | 39% id, 44% cov |
| Shew_3006: hypothetical protein (RefSeq) is similar to: | PaperBLAST |
lutC / O32259: component of an iron-sulfur oxidase for L-lactate utilization (EC 1.1.1.27) from Bacillus subtilis | 28% id, 58% cov |
Q5F884: L-lactate dehydrogenase (subunit 2/3) (EC 1.1.1.27) from Neisseria gonorrhoeae | 26% id, 43% cov |
| Shew_2864: 3-hydroxyacyl-CoA dehydrogenase, NAD-binding (RefSeq) is similar to: | PaperBLAST |
P00345: L-lactate dehydrogenase (EC 1.1.1.27) from Priestia megaterium | 29% id, 44% cov |
| Shew_0070: iron-containing alcohol dehydrogenase (RefSeq) is similar to: | PaperBLAST |
I3VSF1: alcohol dehydrogenase (EC 1.1.1.1); L-lactate dehydrogenase (EC 1.1.1.27); acetaldehyde dehydrogenase (acetylating) (EC 1.2.1.10) from Thermoanaerobacterium saccharolyticum | 25% id, 46% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 7 reading frames. These were all redundant with annotated proteins.
Lawrence Berkeley National Laboratory