Curated BLAST for Genomes


Curated BLAST

Searching in Shewanella loihica PV-4 (PV4)

Found 11 curated entries in PaperBLAST's database that match '' as complete word(s).

These curated entries have 11 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Shewanella loihica PV-4, or try another query

Shew_0288: ketol-acid reductoisomerase (RefSeq)
is similar to:

A0KS29: ketol-acid reductoisomerase [NAD(P)+] (EC from Shewanella sp.

90% id,
100% cov

P05793: ketol-acid reductoisomerase [NAD(P)+] (EC; ketol-acid reductoisomerase (NADP+) (EC from Escherichia coli

71% id,
99% cov

ilvC / O27491: acetohydroxy-acid isomeroreductase subunit (EC from Methanothermobacter thermautotrophicus

35% id,
87% cov


The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory