Searching in Shewanella loihica PV-4 (PV4)
Found 24 curated entries in PaperBLAST's database that match '1.1.1.6' as complete word(s).
These curated entries have 15 distinct sequences.
Running ublast with E ≤ 0.01
Found 14 relevant proteins in Shewanella loihica PV-4, or try another query
| Shew_2862: short chain dehydrogenase (RefSeq) is similar to: | PaperBLAST |
GOLD_LISIN / Q92EU6: NAD-dependent glycerol dehydrogenase; Dha-forming NAD-dependent glycerol dehydrogenase; EC 1.1.1.6 from Listeria innocua | 37% id, 96% cov |
| Shew_1166: iron-containing alcohol dehydrogenase (RefSeq) is similar to: | PaperBLAST |
ADH1_GEOTN / A4IP64: Long-chain-alcohol dehydrogenase 1; Alcohol dehydrogenase 1; ADH1; Fatty alcohol oxidoreductase 1; Glycerol dehydrogenase; EC 1.1.1.192; EC 1.1.1.6 from Geobacillus thermodenitrificans | 35% id, 91% cov |
| Shew_1603: 3-oxoacyl-(acyl-carrier-protein) reductase (RefSeq) is similar to: | PaperBLAST |
GOLD_LISIN / Q92EU6: NAD-dependent glycerol dehydrogenase; Dha-forming NAD-dependent glycerol dehydrogenase; EC 1.1.1.6 from Listeria innocua | 33% id, 95% cov |
| Shew_1910: bifunctional acetaldehyde-CoA/alcohol dehydrogenase (RefSeq) is similar to: | PaperBLAST |
ADH1_GEOTN / A4IP64: Long-chain-alcohol dehydrogenase 1; Alcohol dehydrogenase 1; ADH1; Fatty alcohol oxidoreductase 1; Glycerol dehydrogenase; EC 1.1.1.192; EC 1.1.1.6 from Geobacillus thermodenitrificans | 33% id, 90% cov |
| Shew_1673: 3-ketoacyl-(acyl-carrier-protein) reductase (RefSeq) is similar to: | PaperBLAST |
GOLD_LISIN / Q92EU6: NAD-dependent glycerol dehydrogenase; Dha-forming NAD-dependent glycerol dehydrogenase; EC 1.1.1.6 from Listeria innocua | 31% id, 96% cov |
| Shew_2863: short-chain dehydrogenase/reductase SDR (RefSeq) is similar to: | PaperBLAST |
GOLD_LISIN / Q92EU6: NAD-dependent glycerol dehydrogenase; Dha-forming NAD-dependent glycerol dehydrogenase; EC 1.1.1.6 from Listeria innocua | 30% id, 95% cov |
| Shew_1326: short-chain dehydrogenase/reductase SDR (RefSeq) is similar to: | PaperBLAST |
GOLD_LISIN / Q92EU6: NAD-dependent glycerol dehydrogenase; Dha-forming NAD-dependent glycerol dehydrogenase; EC 1.1.1.6 from Listeria innocua | 30% id, 96% cov |
| Shew_3525: 3-ketoacyl-(acyl-carrier-protein) reductase (RefSeq) is similar to: | PaperBLAST |
GOLD_LISIN / Q92EU6: NAD-dependent glycerol dehydrogenase; Dha-forming NAD-dependent glycerol dehydrogenase; EC 1.1.1.6 from Listeria innocua | 30% id, 93% cov |
| Shew_2557: short-chain dehydrogenase/reductase SDR (RefSeq) is similar to: | PaperBLAST |
GOLD_LISIN / Q92EU6: NAD-dependent glycerol dehydrogenase; Dha-forming NAD-dependent glycerol dehydrogenase; EC 1.1.1.6 from Listeria innocua | 30% id, 93% cov |
| Shew_1959: short chain dehydrogenase (RefSeq) is similar to: | PaperBLAST |
GOLD_LISIN / Q92EU6: NAD-dependent glycerol dehydrogenase; Dha-forming NAD-dependent glycerol dehydrogenase; EC 1.1.1.6 from Listeria innocua | 28% id, 96% cov |
| Shew_1332: short-chain dehydrogenase/reductase SDR (RefSeq) is similar to: | PaperBLAST |
GOLD_LISIN / Q92EU6: NAD-dependent glycerol dehydrogenase; Dha-forming NAD-dependent glycerol dehydrogenase; EC 1.1.1.6 from Listeria innocua | 26% id, 95% cov |
| Shew_0070: iron-containing alcohol dehydrogenase (RefSeq) is similar to: | PaperBLAST |
ADH1_GEOTN / A4IP64: Long-chain-alcohol dehydrogenase 1; Alcohol dehydrogenase 1; ADH1; Fatty alcohol oxidoreductase 1; Glycerol dehydrogenase; EC 1.1.1.192; EC 1.1.1.6 from Geobacillus thermodenitrificans | 25% id, 93% cov |
| Shew_3415: short chain dehydrogenase (RefSeq) is similar to: | PaperBLAST |
GOLD_LISIN / Q92EU6: NAD-dependent glycerol dehydrogenase; Dha-forming NAD-dependent glycerol dehydrogenase; EC 1.1.1.6 from Listeria innocua | 25% id, 80% cov |
| Shew_1857: iron-containing alcohol dehydrogenase (RefSeq) is similar to: | PaperBLAST |
ADH1_GEOTN / A4IP64: Long-chain-alcohol dehydrogenase 1; Alcohol dehydrogenase 1; ADH1; Fatty alcohol oxidoreductase 1; Glycerol dehydrogenase; EC 1.1.1.192; EC 1.1.1.6 from Geobacillus thermodenitrificans | 27% id, 71% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 14 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.
| 1922872-1923702 (frame +1) on 113993 is similar to: | PaperBLAST |
GOLD_LISIN / Q92EU6: NAD-dependent glycerol dehydrogenase; Dha-forming NAD-dependent glycerol dehydrogenase; EC 1.1.1.6 from Listeria innocua | 32% id, 98% cov |
Lawrence Berkeley National Laboratory