Searching in Shewanella loihica PV-4 (PV4)
Found 11 curated entries in PaperBLAST's database that match '1.1.1.67' as complete word(s).
These curated entries have 9 distinct sequences.
Running ublast with E ≤ 0.01
Found 6 relevant proteins in Shewanella loihica PV-4, or try another query
| Shew_2862: short chain dehydrogenase (RefSeq) is similar to: | PaperBLAST |
lxr1 / Q8NK50: D-mannitol 2-dehydrogenase (EC 1.1.1.67) from Hypocrea jecorina | 32% id, 95% cov |
| Shew_1603: 3-oxoacyl-(acyl-carrier-protein) reductase (RefSeq) is similar to: | PaperBLAST |
lxr1 / Q8NK50: D-mannitol 2-dehydrogenase (EC 1.1.1.67) from Hypocrea jecorina | 31% id, 93% cov |
| Shew_3710: L-threonine 3-dehydrogenase (RefSeq) is similar to: | PaperBLAST |
Q6ECH5: mannitol 2-dehydrogenase (EC 1.1.1.67) from Limosilactobacillus reuteri | 30% id, 96% cov |
Q83VI5: mannitol 2-dehydrogenase (EC 1.1.1.67) from Leuconostoc pseudomesenteroides | 32% id, 90% cov |
Q8KQG6: mannitol 2-dehydrogenase (EC 1.1.1.67) from Leuconostoc mesenteroides | 31% id, 91% cov |
| Shew_1322: short-chain dehydrogenase/reductase SDR (RefSeq) is similar to: | PaperBLAST |
lxr1 / Q8NK50: D-mannitol 2-dehydrogenase (EC 1.1.1.67) from Hypocrea jecorina | 29% id, 92% cov |
| Shew_1959: short chain dehydrogenase (RefSeq) is similar to: | PaperBLAST |
lxr1 / Q8NK50: D-mannitol 2-dehydrogenase (EC 1.1.1.67) from Hypocrea jecorina | 28% id, 94% cov |
| Shew_1540: alcohol dehydrogenase (RefSeq) is similar to: | PaperBLAST |
Q83VI5: mannitol 2-dehydrogenase (EC 1.1.1.67) from Leuconostoc pseudomesenteroides | 23% id, 91% cov |
Q8KQG6: mannitol 2-dehydrogenase (EC 1.1.1.67) from Leuconostoc mesenteroides | 22% id, 91% cov |
Q6ECH5: mannitol 2-dehydrogenase (EC 1.1.1.67) from Limosilactobacillus reuteri | 24% id, 83% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 6 reading frames. Except for 2 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.
| 3393634-3394503 (frame +1) on 113993 is similar to: | PaperBLAST |
lxr1 / Q8NK50: D-mannitol 2-dehydrogenase (EC 1.1.1.67) from Hypocrea jecorina | 31% id, 99% cov |
| 4414874-4415959 (frame +2) on 113993 is similar to: | PaperBLAST |
Q83VI5: mannitol 2-dehydrogenase (EC 1.1.1.67) from Leuconostoc pseudomesenteroides | 31% id, 95% cov |
Lawrence Berkeley National Laboratory