Searching in Shewanella loihica PV-4 (PV4)
Found 14 curated entries in PaperBLAST's database that match '1.1.1.71' as complete word(s).
These curated entries have 14 distinct sequences.
Running ublast with E ≤ 0.01
Found 18 relevant proteins in Shewanella loihica PV-4, or try another query
| Shew_1910: bifunctional acetaldehyde-CoA/alcohol dehydrogenase (RefSeq) is similar to: | PaperBLAST |
A0A0H3W5U9: alcohol dehydrogenase [NAD(P)+] (EC 1.1.1.71); acetaldehyde dehydrogenase (acetylating) (EC 1.2.1.10) from Acetivibrio thermocellus | 62% id, 99% cov |
A0A0H3W5V0: alcohol dehydrogenase [NAD(P)+] (EC 1.1.1.71) from Thermoanaerobacterium saccharolyticum | 49% id, 99% cov |
O58517: alcohol dehydrogenase [NAD(P)+] (EC 1.1.1.71) from Pyrococcus horikoshii | 35% id, 99% cov |
| Shew_0070: iron-containing alcohol dehydrogenase (RefSeq) is similar to: | PaperBLAST |
U6CL97: alcohol dehydrogenase (NADP+) (EC 1.1.1.2); alcohol dehydrogenase [NAD(P)+] (EC 1.1.1.71) from Pectobacterium atrosepticum | 55% id, 100% cov |
| Shew_3048: alcohol dehydrogenase (RefSeq) is similar to: | PaperBLAST |
Q8H0L8: alcohol dehydrogenase [NAD(P)+] (EC 1.1.1.71) from Solanum tuberosum | 46% id, 95% cov |
| Shew_1540: alcohol dehydrogenase (RefSeq) is similar to: | PaperBLAST |
Q9HMB6: alcohol dehydrogenase [NAD(P)+] (EC 1.1.1.71) from Halobacterium sp. | 31% id, 99% cov |
D4GP73: alcohol dehydrogenase [NAD(P)+] (EC 1.1.1.71) from Haloferax volcanii | 28% id, 99% cov |
| Shew_1166: iron-containing alcohol dehydrogenase (RefSeq) is similar to: | PaperBLAST |
O58517: alcohol dehydrogenase [NAD(P)+] (EC 1.1.1.71) from Pyrococcus horikoshii | 30% id, 99% cov |
U6CL97: alcohol dehydrogenase (NADP+) (EC 1.1.1.2); alcohol dehydrogenase [NAD(P)+] (EC 1.1.1.71) from Pectobacterium atrosepticum | 25% id, 88% cov |
A0A0H3W5V0: alcohol dehydrogenase [NAD(P)+] (EC 1.1.1.71) from Thermoanaerobacterium saccharolyticum | 39% id, 44% cov |
| Shew_3415: short chain dehydrogenase (RefSeq) is similar to: | PaperBLAST |
C6A190: alcohol dehydrogenase (NADP+) (EC 1.1.1.2); alcohol dehydrogenase [NAD(P)+] (EC 1.1.1.71) from Thermococcus sibiricus | 29% id, 98% cov |
Q9HBH5: NADP-retinol dehydrogenase (EC 1.1.1.300); alcohol dehydrogenase [NAD(P)+] (EC 1.1.1.71) from Homo sapiens | 32% id, 44% cov |
| Shew_3710: L-threonine 3-dehydrogenase (RefSeq) is similar to: | PaperBLAST |
D4GP73: alcohol dehydrogenase [NAD(P)+] (EC 1.1.1.71) from Haloferax volcanii | 29% id, 95% cov |
Q8H0L8: alcohol dehydrogenase [NAD(P)+] (EC 1.1.1.71) from Solanum tuberosum | 27% id, 68% cov |
| Shew_1603: 3-oxoacyl-(acyl-carrier-protein) reductase (RefSeq) is similar to: | PaperBLAST |
C6A190: alcohol dehydrogenase (NADP+) (EC 1.1.1.2); alcohol dehydrogenase [NAD(P)+] (EC 1.1.1.71) from Thermococcus sibiricus | 28% id, 90% cov |
Q9HBH5: NADP-retinol dehydrogenase (EC 1.1.1.300); alcohol dehydrogenase [NAD(P)+] (EC 1.1.1.71) from Homo sapiens | 27% id, 75% cov |
| Shew_2862: short chain dehydrogenase (RefSeq) is similar to: | PaperBLAST |
C6A190: alcohol dehydrogenase (NADP+) (EC 1.1.1.2); alcohol dehydrogenase [NAD(P)+] (EC 1.1.1.71) from Thermococcus sibiricus | 29% id, 80% cov |
| Shew_1959: short chain dehydrogenase (RefSeq) is similar to: | PaperBLAST |
C6A190: alcohol dehydrogenase (NADP+) (EC 1.1.1.2); alcohol dehydrogenase [NAD(P)+] (EC 1.1.1.71) from Thermococcus sibiricus | 24% id, 95% cov |
| Shew_2557: short-chain dehydrogenase/reductase SDR (RefSeq) is similar to: | PaperBLAST |
C6A190: alcohol dehydrogenase (NADP+) (EC 1.1.1.2); alcohol dehydrogenase [NAD(P)+] (EC 1.1.1.71) from Thermococcus sibiricus | 31% id, 72% cov |
CBR1_MOUSE / P48758: Carbonyl reductase [NADPH] 1; 15-hydroxyprostaglandin dehydrogenase [NADP(+)]; 20-beta-hydroxysteroid dehydrogenase; Alcohol dehydrogenase [NAD(P)+] CBR1; NADPH-dependent carbonyl reductase 1; Prostaglandin 9-ketoreductase; PG-9-KR; Prostaglandin-E(2) 9-reductase; EC 1.1.1.184; EC 1.1.1.196; EC 1.1.1.197; EC 1.1.1.71; EC 1.1.1.189 from Mus musculus | 25% id, 65% cov |
| Shew_3525: 3-ketoacyl-(acyl-carrier-protein) reductase (RefSeq) is similar to: | PaperBLAST |
C6A190: alcohol dehydrogenase (NADP+) (EC 1.1.1.2); alcohol dehydrogenase [NAD(P)+] (EC 1.1.1.71) from Thermococcus sibiricus | 26% id, 81% cov |
| Shew_2863: short-chain dehydrogenase/reductase SDR (RefSeq) is similar to: | PaperBLAST |
Q9HBH5: NADP-retinol dehydrogenase (EC 1.1.1.300); alcohol dehydrogenase [NAD(P)+] (EC 1.1.1.71) from Homo sapiens | 27% id, 78% cov |
| Shew_2409: short chain dehydrogenase (RefSeq) is similar to: | PaperBLAST |
Q9HBH5: NADP-retinol dehydrogenase (EC 1.1.1.300); alcohol dehydrogenase [NAD(P)+] (EC 1.1.1.71) from Homo sapiens | 25% id, 79% cov |
| Shew_1857: iron-containing alcohol dehydrogenase (RefSeq) is similar to: | PaperBLAST |
O58517: alcohol dehydrogenase [NAD(P)+] (EC 1.1.1.71) from Pyrococcus horikoshii | 22% id, 91% cov |
| Shew_1326: short-chain dehydrogenase/reductase SDR (RefSeq) is similar to: | PaperBLAST |
Q9HBH5: NADP-retinol dehydrogenase (EC 1.1.1.300); alcohol dehydrogenase [NAD(P)+] (EC 1.1.1.71) from Homo sapiens | 26% id, 65% cov |
| Shew_1673: 3-ketoacyl-(acyl-carrier-protein) reductase (RefSeq) is similar to: | PaperBLAST |
CBR1_RAT / P47727: Carbonyl reductase [NADPH] 1; 15-hydroxyprostaglandin dehydrogenase [NADP(+)]; 20-beta-hydroxysteroid dehydrogenase; Alcohol dehydrogenase [NAD(P)+] CBR1; NADPH-dependent carbonyl reductase 1; Prostaglandin 9-ketoreductase; PG-9-KR; Prostaglandin-E(2) 9-reductase; EC 1.1.1.184; EC 1.1.1.196; EC 1.1.1.197; EC 1.1.1.71; EC 1.1.1.189 from Rattus norvegicus | 25% id, 48% cov |
| Shew_0967: aldehyde dehydrogenase (RefSeq) is similar to: | PaperBLAST |
A0A0H3W5U9: alcohol dehydrogenase [NAD(P)+] (EC 1.1.1.71); acetaldehyde dehydrogenase (acetylating) (EC 1.2.1.10) from Acetivibrio thermocellus | 22% id, 32% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 16 reading frames. Except for 2 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.
| 3620535-3621647 (frame +3) on 113993 is similar to: | PaperBLAST |
Q8H0L8: alcohol dehydrogenase [NAD(P)+] (EC 1.1.1.71) from Solanum tuberosum | 46% id, 98% cov |
| 3394353-3395264 (frame +3) on 113993 is similar to: | PaperBLAST |
Q9HBH5: NADP-retinol dehydrogenase (EC 1.1.1.300); alcohol dehydrogenase [NAD(P)+] (EC 1.1.1.71) from Homo sapiens | 26% id, 83% cov |
Lawrence Berkeley National Laboratory