Searching in Shewanella loihica PV-4 (PV4)
Found 17 curated entries in PaperBLAST's database that match '1.1.2.3' as complete word(s).
These curated entries have 15 distinct sequences.
Running ublast with E ≤ 0.01
Found 5 relevant proteins in Shewanella loihica PV-4, or try another query
| Shew_3004: hypothetical protein (RefSeq) is similar to: | PaperBLAST |
lldE / Q8EGS4: L-lactate dehydrogenase LldE subunit (EC 1.1.2.3) from Shewanella oneidensis | 89% id, 100% cov |
DVU_3033 / Q726S3: quinone-dependent L-lactate dehydrogenase large subunit (EC 1.1.2.3) from Desulfovibrio vulgaris | 29% id, 33% cov |
| Shew_3005: 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein (RefSeq) is similar to: | PaperBLAST |
lldG / Q8EGS5: L-lactate dehydrogenase iron-sulfur cluster-binding protein LldF (EC 1.1.2.3) from Shewanella oneidensis | 88% id, 98% cov |
DVU_3033 / Q726S3: quinone-dependent L-lactate dehydrogenase large subunit (EC 1.1.2.3) from Desulfovibrio vulgaris | 34% id, 58% cov |
| Shew_3006: hypothetical protein (RefSeq) is similar to: | PaperBLAST |
lldF / Q8EGS6: L-lactate dehydrogenase LldF subunit (EC 1.1.2.3) from Shewanella oneidensis | 77% id, 100% cov |
DVU_3032 / Q726S4: quinone-dependent L-lactate dehydrogenase small subunit (EC 1.1.2.3) from Desulfovibrio vulgaris | 32% id, 50% cov |
| Shew_1032: glutamate synthase subunit alpha (RefSeq) is similar to: | PaperBLAST |
CYB2_YEAST / P00175: L-lactate dehydrogenase (cytochrome); Cytochrome b2; Flavocytochrome b2; FCB2; L-lactate ferricytochrome c oxidoreductase; L-LCR; EC 1.1.2.3 from Saccharomyces cerevisiae | 32% id, 22% cov |
SM_b20850: L-lactate dehydrogenase (cytochrome) (EC 1.1.2.3) from Sinorhizobium meliloti | 30% id, 20% cov |
W1QKE8: L-lactate dehydrogenase (cytochrome) (EC 1.1.2.3) from Ogataea angusta | 28% id, 19% cov |
| Shew_2984: ferredoxin-dependent glutamate synthase (RefSeq) is similar to: | PaperBLAST |
CYB2_YEAST / P00175: L-lactate dehydrogenase (cytochrome); Cytochrome b2; Flavocytochrome b2; FCB2; L-lactate ferricytochrome c oxidoreductase; L-LCR; EC 1.1.2.3 from Saccharomyces cerevisiae | 25% id, 18% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 5 reading frames. These were all redundant with annotated proteins.
Lawrence Berkeley National Laboratory