Searching in Shewanella loihica PV-4 (PV4)
Found 163 curated entries in PaperBLAST's database that match '1.13.11.5'.
These curated entries have 126 distinct sequences.
Running ublast with E ≤ 0.01
Found 2 relevant proteins in Shewanella loihica PV-4, or try another query
| Shew_2154: homogentisate 1,2-dioxygenase (RefSeq) is similar to: | PaperBLAST |
SO1963: Homogentisate 1,2-dioxygenase (EC 1.13.11.5) from Shewanella oneidensis | 86% id, 100% cov |
Psest_3513: Homogentisate 1,2-dioxygenase (EC 1.13.11.5) from Pseudomonas stutzeri | 30% id, 97% cov |
| Shew_2275: extradiol ring-cleavage dioxygenase III subunit B (RefSeq) is similar to: | PaperBLAST |
desB / Q5NTE5: gallate dioxygenase monomer (EC 1.13.11.57) from Sphingomonas paucimobilis | 31% id, 25% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 2 reading frames. These were all redundant with annotated proteins.
Lawrence Berkeley National Laboratory