Curated BLAST for Genomes

 

Curated BLAST

Searching in Shewanella loihica PV-4 (PV4)

Found 22 curated entries in PaperBLAST's database that match '1.14.13.9' as complete word(s).

These curated entries have 14 distinct sequences.

Running ublast with E ≤ 0.01

Found 5 relevant proteins in Shewanella loihica PV-4, or try another query

Shew_2921: UbiH/UbiF/VisC/COQ6 family ubiquinone biosynthesis hydroxylase (RefSeq)
is similar to:
PaperBLAST

orf19.5443: kynurenine 3-monooxygenase; EC 1.14.13.9 from Candida albicans

25% id,
86% cov

KMO_RAT / O88867: Kynurenine 3-monooxygenase; Kynurenine 3-hydroxylase; EC 1.14.13.9 from Rattus norvegicus
O88867: kynurenine 3-monooxygenase (EC 1.14.13.9) from Rattus norvegicus

25% id,
69% cov

Q8ISJ5: kynurenine 3-monooxygenase (EC 1.14.13.9) from Anopheles stephensi

25% id,
71% cov

More...

Shew_3065: UbiH/UbiF/VisC/COQ6 family ubiquinone biosynthesis hydroxylase (RefSeq)
is similar to:
PaperBLAST

KMO_CYTH3 / Q11PP7: Kynurenine 3-monooxygenase; Kynurenine 3-hydroxylase; EC 1.14.13.9 from Cytophaga hutchinsonii
Q11PP7: kynurenine 3-monooxygenase (EC 1.14.13.9) from Cytophaga hutchinsonii

26% id,
80% cov

Q8ISJ5: kynurenine 3-monooxygenase (EC 1.14.13.9) from Anopheles stephensi

27% id,
73% cov

KMO_AEDAE / Q86PM2: Kynurenine 3-monooxygenase; Kynurenine 3-hydroxylase; EC 1.14.13.9 from Aedes aegypti
Q86PM2: kynurenine 3-monooxygenase (EC 1.14.13.9) from Aedes aegypti

24% id,
75% cov

More...

Shew_3066: 2-polyprenyl-6-methoxyphenol 4-hydroxylase (RefSeq)
is similar to:
PaperBLAST

orf19.5443: kynurenine 3-monooxygenase; EC 1.14.13.9 from Candida albicans

24% id,
53% cov

Shew_2679: FAD dependent oxidoreductase (RefSeq)
is similar to:
PaperBLAST

orf19.5443: kynurenine 3-monooxygenase; EC 1.14.13.9 from Candida albicans

30% id,
28% cov

Shew_1942: NADH:flavin oxidoreductase/NADH oxidase (RefSeq)
is similar to:
PaperBLAST

ACDD_ASPCN / A0A2I2F284: Kynurenine 3-monooxygenase acdD; Aspcandine biosynthesis gene cluster protein D; Kynurenine 3-hydroxylase acdD; EC 1.14.13.9 from Aspergillus candidus

34% id,
8% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 3 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.

2856368-2858632 (frame +2) on 113993
is similar to:
PaperBLAST

A1Z745: kynurenine 3-monooxygenase (EC 1.14.13.9) from Drosophila melanogaster

37% id,
15% cov

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory