Searching in Shewanella loihica PV-4 (PV4)
Found 5 curated entries in PaperBLAST's database that match '1.2.1.20'.
These curated entries have 5 distinct sequences.
Running ublast with E ≤ 0.01
Found 9 relevant proteins in Shewanella loihica PV-4, or try another query
| Shew_3173: succinic semialdehyde dehydrogenase (RefSeq) is similar to: | PaperBLAST |
davD / Q9I6M5: glutarate semialdehyde dehydrogenase (EC 1.2.1.20) from Pseudomonas aeruginosa | 61% id, 100% cov |
Q88RC0: glutarate-semialdehyde dehydrogenase (EC 1.2.1.20) from Pseudomonas putida | 59% id, 100% cov |
PfGW456L13_495: Glutarate-semialdehyde dehydrogenase (EC 1.2.1.20) from Pseudomonas fluorescens | 59% id, 100% cov |
| Shew_0967: aldehyde dehydrogenase (RefSeq) is similar to: | PaperBLAST |
Q88RC0: glutarate-semialdehyde dehydrogenase (EC 1.2.1.20) from Pseudomonas putida | 35% id, 100% cov |
gabD / P25526: succinate-semialdehyde dehydrogenase (NADP+) GabD (EC 1.2.1.79; EC 1.2.1.20) from Escherichia coli | 35% id, 100% cov |
davD / Q9I6M5: glutarate semialdehyde dehydrogenase (EC 1.2.1.20) from Pseudomonas aeruginosa | 35% id, 99% cov |
| Shew_3574: aldehyde dehydrogenase (RefSeq) is similar to: | PaperBLAST |
Q88RC0: glutarate-semialdehyde dehydrogenase (EC 1.2.1.20) from Pseudomonas putida | 35% id, 98% cov |
gabD / P25526: succinate-semialdehyde dehydrogenase (NADP+) GabD (EC 1.2.1.79; EC 1.2.1.20) from Escherichia coli | 34% id, 98% cov |
davD / Q9I6M5: glutarate semialdehyde dehydrogenase (EC 1.2.1.20) from Pseudomonas aeruginosa | 34% id, 98% cov |
| Shew_0580: succinylglutamic semialdehyde dehydrogenase (RefSeq) is similar to: | PaperBLAST |
Q88RC0: glutarate-semialdehyde dehydrogenase (EC 1.2.1.20) from Pseudomonas putida | 32% id, 95% cov |
gabD / P25526: succinate-semialdehyde dehydrogenase (NADP+) GabD (EC 1.2.1.79; EC 1.2.1.20) from Escherichia coli | 32% id, 95% cov |
davD / Q9I6M5: glutarate semialdehyde dehydrogenase (EC 1.2.1.20) from Pseudomonas aeruginosa | 32% id, 95% cov |
| Shew_0615: bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase (RefSeq) is similar to: | PaperBLAST |
davD / Q9I6M5: glutarate semialdehyde dehydrogenase (EC 1.2.1.20) from Pseudomonas aeruginosa | 32% id, 96% cov |
Q88RC0: glutarate-semialdehyde dehydrogenase (EC 1.2.1.20) from Pseudomonas putida | 31% id, 98% cov |
PfGW456L13_495: Glutarate-semialdehyde dehydrogenase (EC 1.2.1.20) from Pseudomonas fluorescens | 31% id, 96% cov |
| Shew_0965: methylmalonate-semialdehyde dehydrogenase (RefSeq) is similar to: | PaperBLAST |
davD / Q9I6M5: glutarate semialdehyde dehydrogenase (EC 1.2.1.20) from Pseudomonas aeruginosa | 33% id, 93% cov |
PfGW456L13_495: Glutarate-semialdehyde dehydrogenase (EC 1.2.1.20) from Pseudomonas fluorescens | 33% id, 93% cov |
sad / P76149: succinate semialdehyde dehydrogenase (NAD(P)+) Sad (EC 1.2.1.24; EC 1.2.1.20) from Escherichia coli | 32% id, 95% cov |
| Shew_1668: methylmalonate-semialdehyde dehydrogenase (RefSeq) is similar to: | PaperBLAST |
Q88RC0: glutarate-semialdehyde dehydrogenase (EC 1.2.1.20) from Pseudomonas putida | 29% id, 96% cov |
gabD / P25526: succinate-semialdehyde dehydrogenase (NADP+) GabD (EC 1.2.1.79; EC 1.2.1.20) from Escherichia coli | 29% id, 96% cov |
PfGW456L13_495: Glutarate-semialdehyde dehydrogenase (EC 1.2.1.20) from Pseudomonas fluorescens | 28% id, 96% cov |
| Shew_3103: aldehyde dehydrogenase (RefSeq) is similar to: | PaperBLAST |
gabD / P25526: succinate-semialdehyde dehydrogenase (NADP+) GabD (EC 1.2.1.79; EC 1.2.1.20) from Escherichia coli | 28% id, 91% cov |
Q88RC0: glutarate-semialdehyde dehydrogenase (EC 1.2.1.20) from Pseudomonas putida | 29% id, 83% cov |
davD / Q9I6M5: glutarate semialdehyde dehydrogenase (EC 1.2.1.20) from Pseudomonas aeruginosa | 32% id, 69% cov |
| Shew_2364: aldehyde dehydrogenase (RefSeq) is similar to: | PaperBLAST |
PfGW456L13_495: Glutarate-semialdehyde dehydrogenase (EC 1.2.1.20) from Pseudomonas fluorescens | 25% id, 97% cov |
gabD / P25526: succinate-semialdehyde dehydrogenase (NADP+) GabD (EC 1.2.1.79; EC 1.2.1.20) from Escherichia coli | 26% id, 88% cov |
davD / Q9I6M5: glutarate semialdehyde dehydrogenase (EC 1.2.1.20) from Pseudomonas aeruginosa | 23% id, 87% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 10 reading frames. These were all redundant with annotated proteins.
Lawrence Berkeley National Laboratory