Searching in Shewanella loihica PV-4 (PV4)
Found 15 curated entries in PaperBLAST's database that match '1.2.1.22'.
These curated entries have 10 distinct sequences.
Running ublast with E ≤ 0.01
Found 20 relevant proteins in Shewanella loihica PV-4, or try another query
| Shew_3173: succinic semialdehyde dehydrogenase (RefSeq) is similar to: | PaperBLAST |
ALDA_ECOLI / P25553: Lactaldehyde dehydrogenase; Aldehyde dehydrogenase A; Glycolaldehyde dehydrogenase; EC 1.2.1.22; EC 1.2.1.21 from Escherichia coli | 37% id, 98% cov |
ladh / C1DMY3: NAD+-dependent L-lactaldehyde dehydrogenase (EC 1.2.1.22) from Azotobacter vinelandii | 37% id, 98% cov |
LADH_METJA / Q58806: Lactaldehyde dehydrogenase; EC 1.2.1.22 from Methanocaldococcus jannaschii | 33% id, 100% cov |
| Shew_0967: aldehyde dehydrogenase (RefSeq) is similar to: | PaperBLAST |
ladh / C1DMY3: NAD+-dependent L-lactaldehyde dehydrogenase (EC 1.2.1.22) from Azotobacter vinelandii | 34% id, 100% cov |
Q97UA1: lactaldehyde dehydrogenase (EC 1.2.1.22); 2,5-dioxovalerate dehydrogenase (EC 1.2.1.26) from Saccharolobus solfataricus | 34% id, 96% cov |
LADH_METJA / Q58806: Lactaldehyde dehydrogenase; EC 1.2.1.22 from Methanocaldococcus jannaschii | 32% id, 100% cov |
| Shew_1668: methylmalonate-semialdehyde dehydrogenase (RefSeq) is similar to: | PaperBLAST |
Q97UA1: lactaldehyde dehydrogenase (EC 1.2.1.22); 2,5-dioxovalerate dehydrogenase (EC 1.2.1.26) from Saccharolobus solfataricus | 33% id, 100% cov |
ALDA_ECOLI / P25553: Lactaldehyde dehydrogenase; Aldehyde dehydrogenase A; Glycolaldehyde dehydrogenase; EC 1.2.1.22; EC 1.2.1.21 from Escherichia coli | 32% id, 99% cov |
ladh / C1DMY3: NAD+-dependent L-lactaldehyde dehydrogenase (EC 1.2.1.22) from Azotobacter vinelandii | 29% id, 97% cov |
| Shew_3574: aldehyde dehydrogenase (RefSeq) is similar to: | PaperBLAST |
Q97UA1: lactaldehyde dehydrogenase (EC 1.2.1.22); 2,5-dioxovalerate dehydrogenase (EC 1.2.1.26) from Saccharolobus solfataricus | 34% id, 98% cov |
ladh / C1DMY3: NAD+-dependent L-lactaldehyde dehydrogenase (EC 1.2.1.22) from Azotobacter vinelandii | 33% id, 97% cov |
LADH_METJA / Q58806: Lactaldehyde dehydrogenase; EC 1.2.1.22 from Methanocaldococcus jannaschii | 32% id, 100% cov |
| Shew_0965: methylmalonate-semialdehyde dehydrogenase (RefSeq) is similar to: | PaperBLAST |
Q97UA1: lactaldehyde dehydrogenase (EC 1.2.1.22); 2,5-dioxovalerate dehydrogenase (EC 1.2.1.26) from Saccharolobus solfataricus | 33% id, 96% cov |
ladh / C1DMY3: NAD+-dependent L-lactaldehyde dehydrogenase (EC 1.2.1.22) from Azotobacter vinelandii | 32% id, 97% cov |
ALDA_ECOLI / P25553: Lactaldehyde dehydrogenase; Aldehyde dehydrogenase A; Glycolaldehyde dehydrogenase; EC 1.2.1.22; EC 1.2.1.21 from Escherichia coli | 30% id, 98% cov |
| Shew_0615: bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase (RefSeq) is similar to: | PaperBLAST |
Q97UA1: lactaldehyde dehydrogenase (EC 1.2.1.22); 2,5-dioxovalerate dehydrogenase (EC 1.2.1.26) from Saccharolobus solfataricus | 31% id, 99% cov |
ALDA_ECOLI / P25553: Lactaldehyde dehydrogenase; Aldehyde dehydrogenase A; Glycolaldehyde dehydrogenase; EC 1.2.1.22; EC 1.2.1.21 from Escherichia coli | 28% id, 96% cov |
ladh / C1DMY3: NAD+-dependent L-lactaldehyde dehydrogenase (EC 1.2.1.22) from Azotobacter vinelandii | 27% id, 94% cov |
| Shew_0580: succinylglutamic semialdehyde dehydrogenase (RefSeq) is similar to: | PaperBLAST |
ladh / C1DMY3: NAD+-dependent L-lactaldehyde dehydrogenase (EC 1.2.1.22) from Azotobacter vinelandii | 32% id, 95% cov |
ALDA_ECOLI / P25553: Lactaldehyde dehydrogenase; Aldehyde dehydrogenase A; Glycolaldehyde dehydrogenase; EC 1.2.1.22; EC 1.2.1.21 from Escherichia coli | 32% id, 95% cov |
Q97UA1: lactaldehyde dehydrogenase (EC 1.2.1.22); 2,5-dioxovalerate dehydrogenase (EC 1.2.1.26) from Saccharolobus solfataricus | 31% id, 99% cov |
| Shew_3103: aldehyde dehydrogenase (RefSeq) is similar to: | PaperBLAST |
ladh / C1DMY3: NAD+-dependent L-lactaldehyde dehydrogenase (EC 1.2.1.22) from Azotobacter vinelandii | 29% id, 95% cov |
Q97UA1: lactaldehyde dehydrogenase (EC 1.2.1.22); 2,5-dioxovalerate dehydrogenase (EC 1.2.1.26) from Saccharolobus solfataricus | 29% id, 86% cov |
ALDA_ECOLI / P25553: Lactaldehyde dehydrogenase; Aldehyde dehydrogenase A; Glycolaldehyde dehydrogenase; EC 1.2.1.22; EC 1.2.1.21 from Escherichia coli | 30% id, 73% cov |
| Shew_2364: aldehyde dehydrogenase (RefSeq) is similar to: | PaperBLAST |
LADH_METJA / Q58806: Lactaldehyde dehydrogenase; EC 1.2.1.22 from Methanocaldococcus jannaschii | 23% id, 91% cov |
| Shew_2862: short chain dehydrogenase (RefSeq) is similar to: | PaperBLAST |
Dshi_2436: rhamnulose-1-phosphate aldolase (EC 4.1.2.19) / lactaldehyde dehydrogenase (EC 1.2.1.22) from Dinoroseobacter shibae | 33% id, 37% cov |
rhaEW / P40747: bifunctional L-rhamnulose 1-phosphate aldolase/lactaldehyde dehydrogenase (EC 4.1.2.19; EC 1.2.1.22) from Bacillus subtilis | 32% id, 38% cov |
SMc02322: rhamnulose-1-phosphate aldolase (EC 4.1.2.19) / lactaldehyde dehydrogenase (EC 1.2.1.22) from Sinorhizobium meliloti | 31% id, 37% cov |
| Shew_1603: 3-oxoacyl-(acyl-carrier-protein) reductase (RefSeq) is similar to: | PaperBLAST |
SMc02322: rhamnulose-1-phosphate aldolase (EC 4.1.2.19) / lactaldehyde dehydrogenase (EC 1.2.1.22) from Sinorhizobium meliloti | 31% id, 37% cov |
Dshi_2436: rhamnulose-1-phosphate aldolase (EC 4.1.2.19) / lactaldehyde dehydrogenase (EC 1.2.1.22) from Dinoroseobacter shibae | 30% id, 37% cov |
Echvi_1572: Lactaldehyde dehydrogenase (EC 1.2.1.22); Rhamnulose-1-phosphate aldolase (EC 4.1.2.19) from Echinicola vietnamensis | 30% id, 36% cov |
| Shew_1959: short chain dehydrogenase (RefSeq) is similar to: | PaperBLAST |
rhaEW / P40747: bifunctional L-rhamnulose 1-phosphate aldolase/lactaldehyde dehydrogenase (EC 4.1.2.19; EC 1.2.1.22) from Bacillus subtilis | 30% id, 38% cov |
| Shew_1326: short-chain dehydrogenase/reductase SDR (RefSeq) is similar to: | PaperBLAST |
Echvi_1572: Lactaldehyde dehydrogenase (EC 1.2.1.22); Rhamnulose-1-phosphate aldolase (EC 4.1.2.19) from Echinicola vietnamensis | 30% id, 37% cov |
| Shew_1673: 3-ketoacyl-(acyl-carrier-protein) reductase (RefSeq) is similar to: | PaperBLAST |
SMc02322: rhamnulose-1-phosphate aldolase (EC 4.1.2.19) / lactaldehyde dehydrogenase (EC 1.2.1.22) from Sinorhizobium meliloti | 28% id, 37% cov |
rhaEW / P40747: bifunctional L-rhamnulose 1-phosphate aldolase/lactaldehyde dehydrogenase (EC 4.1.2.19; EC 1.2.1.22) from Bacillus subtilis | 27% id, 38% cov |
Dshi_2436: rhamnulose-1-phosphate aldolase (EC 4.1.2.19) / lactaldehyde dehydrogenase (EC 1.2.1.22) from Dinoroseobacter shibae | 31% id, 27% cov |
| Shew_1407: short-chain dehydrogenase/reductase SDR (RefSeq) is similar to: | PaperBLAST |
Echvi_1572: Lactaldehyde dehydrogenase (EC 1.2.1.22); Rhamnulose-1-phosphate aldolase (EC 4.1.2.19) from Echinicola vietnamensis | 28% id, 36% cov |
rhaEW / A9WGG0: bifunctional L-rhamnulose-phosphate aldolase/L-lactaldehyde dehydrogenase (EC 1.2.1.22; EC 4.1.2.19) from Chloroflexus aurantiacus | 29% id, 28% cov |
| Shew_2863: short-chain dehydrogenase/reductase SDR (RefSeq) is similar to: | PaperBLAST |
SMc02322: rhamnulose-1-phosphate aldolase (EC 4.1.2.19) / lactaldehyde dehydrogenase (EC 1.2.1.22) from Sinorhizobium meliloti | 33% id, 27% cov |
Echvi_1572: Lactaldehyde dehydrogenase (EC 1.2.1.22); Rhamnulose-1-phosphate aldolase (EC 4.1.2.19) from Echinicola vietnamensis | 35% id, 25% cov |
| Shew_2034: short-chain dehydrogenase/reductase SDR (RefSeq) is similar to: | PaperBLAST |
rhaEW / A9WGG0: bifunctional L-rhamnulose-phosphate aldolase/L-lactaldehyde dehydrogenase (EC 1.2.1.22; EC 4.1.2.19) from Chloroflexus aurantiacus | 27% id, 31% cov |
| Shew_2557: short-chain dehydrogenase/reductase SDR (RefSeq) is similar to: | PaperBLAST |
rhaEW / P40747: bifunctional L-rhamnulose 1-phosphate aldolase/lactaldehyde dehydrogenase (EC 4.1.2.19; EC 1.2.1.22) from Bacillus subtilis | 29% id, 28% cov |
rhaEW / A9WGG0: bifunctional L-rhamnulose-phosphate aldolase/L-lactaldehyde dehydrogenase (EC 1.2.1.22; EC 4.1.2.19) from Chloroflexus aurantiacus | 25% id, 27% cov |
| Shew_2285: UDP-glucose 4-epimerase (RefSeq) is similar to: | PaperBLAST |
rhaEW / P40747: bifunctional L-rhamnulose 1-phosphate aldolase/lactaldehyde dehydrogenase (EC 4.1.2.19; EC 1.2.1.22) from Bacillus subtilis | 27% id, 22% cov |
| Shew_3704: dTDP-glucose 4,6-dehydratase (RefSeq) is similar to: | PaperBLAST |
Dshi_2436: rhamnulose-1-phosphate aldolase (EC 4.1.2.19) / lactaldehyde dehydrogenase (EC 1.2.1.22) from Dinoroseobacter shibae | 49% id, 6% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 17 reading frames. Except for 4 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.
| 3393634-3394503 (frame +1) on 113993 is similar to: | PaperBLAST |
Dshi_2436: rhamnulose-1-phosphate aldolase (EC 4.1.2.19) / lactaldehyde dehydrogenase (EC 1.2.1.22) from Dinoroseobacter shibae | 32% id, 38% cov |
SMc02322: rhamnulose-1-phosphate aldolase (EC 4.1.2.19) / lactaldehyde dehydrogenase (EC 1.2.1.22) from Sinorhizobium meliloti | 31% id, 38% cov |
| 1922872-1923702 (frame +1) on 113993 is similar to: | PaperBLAST |
SMc02322: rhamnulose-1-phosphate aldolase (EC 4.1.2.19) / lactaldehyde dehydrogenase (EC 1.2.1.22) from Sinorhizobium meliloti | 28% id, 39% cov |
rhaEW / P40747: bifunctional L-rhamnulose 1-phosphate aldolase/lactaldehyde dehydrogenase (EC 4.1.2.19; EC 1.2.1.22) from Bacillus subtilis | 26% id, 40% cov |
Dshi_2436: rhamnulose-1-phosphate aldolase (EC 4.1.2.19) / lactaldehyde dehydrogenase (EC 1.2.1.22) from Dinoroseobacter shibae | 31% id, 29% cov |
| 3394353-3395264 (frame +3) on 113993 is similar to: | PaperBLAST |
SMc02322: rhamnulose-1-phosphate aldolase (EC 4.1.2.19) / lactaldehyde dehydrogenase (EC 1.2.1.22) from Sinorhizobium meliloti | 33% id, 29% cov |
Echvi_1572: Lactaldehyde dehydrogenase (EC 1.2.1.22); Rhamnulose-1-phosphate aldolase (EC 4.1.2.19) from Echinicola vietnamensis | 34% id, 28% cov |
| 1619755-1620657 (frame +1) on 113993 is similar to: | PaperBLAST |
rhaEW / A9WGG0: bifunctional L-rhamnulose-phosphate aldolase/L-lactaldehyde dehydrogenase (EC 1.2.1.22; EC 4.1.2.19) from Chloroflexus aurantiacus | 28% id, 30% cov |
Lawrence Berkeley National Laboratory