Searching in Shewanella loihica PV-4 (PV4)
Found 10 curated entries in PaperBLAST's database that match '1.2.1.71'.
These curated entries have 6 distinct sequences.
Running ublast with E ≤ 0.01
Found 8 relevant proteins in Shewanella loihica PV-4, or try another query
| Shew_0580: succinylglutamic semialdehyde dehydrogenase (RefSeq) is similar to: | PaperBLAST |
SO0619: Succinylglutamic semialdehyde dehydrogenase (EC 1.2.1.71) from Shewanella oneidensis | 86% id, 100% cov |
Sama_3009: Succinylglutamic semialdehyde dehydrogenase (EC 1.2.1.71) from Shewanella amazonensis | 86% id, 100% cov |
PfGW456L13_1974: Succinylglutamic semialdehyde dehydrogenase (EC 1.2.1.71) from Pseudomonas fluorescens | 60% id, 100% cov |
| Shew_3173: succinic semialdehyde dehydrogenase (RefSeq) is similar to: | PaperBLAST |
Sama_3009: Succinylglutamic semialdehyde dehydrogenase (EC 1.2.1.71) from Shewanella amazonensis | 35% id, 95% cov |
SO0619: Succinylglutamic semialdehyde dehydrogenase (EC 1.2.1.71) from Shewanella oneidensis | 33% id, 94% cov |
ASTD_SALTY / Q8ZPV0: N-succinylglutamate 5-semialdehyde dehydrogenase; Succinylglutamic semialdehyde dehydrogenase; SGSD; EC 1.2.1.71 from Salmonella typhimurium | 32% id, 93% cov |
| Shew_0967: aldehyde dehydrogenase (RefSeq) is similar to: | PaperBLAST |
Sama_3009: Succinylglutamic semialdehyde dehydrogenase (EC 1.2.1.71) from Shewanella amazonensis | 34% id, 94% cov |
ASTD_PSEAE / O50174: N-succinylglutamate 5-semialdehyde dehydrogenase; Succinylglutamic semialdehyde dehydrogenase; SGSD; EC 1.2.1.71 from Pseudomonas aeruginosa | 32% id, 94% cov |
ASTD_ECOLI / P76217: N-succinylglutamate 5-semialdehyde dehydrogenase; Succinylglutamic semialdehyde dehydrogenase; SGSD; EC 1.2.1.71 from Escherichia coli | 32% id, 93% cov |
| Shew_3574: aldehyde dehydrogenase (RefSeq) is similar to: | PaperBLAST |
ASTD_PSEAE / O50174: N-succinylglutamate 5-semialdehyde dehydrogenase; Succinylglutamic semialdehyde dehydrogenase; SGSD; EC 1.2.1.71 from Pseudomonas aeruginosa | 32% id, 93% cov |
PfGW456L13_1974: Succinylglutamic semialdehyde dehydrogenase (EC 1.2.1.71) from Pseudomonas fluorescens | 31% id, 92% cov |
Sama_3009: Succinylglutamic semialdehyde dehydrogenase (EC 1.2.1.71) from Shewanella amazonensis | 30% id, 93% cov |
| Shew_0965: methylmalonate-semialdehyde dehydrogenase (RefSeq) is similar to: | PaperBLAST |
SO0619: Succinylglutamic semialdehyde dehydrogenase (EC 1.2.1.71) from Shewanella oneidensis | 31% id, 91% cov |
ASTD_ECOLI / P76217: N-succinylglutamate 5-semialdehyde dehydrogenase; Succinylglutamic semialdehyde dehydrogenase; SGSD; EC 1.2.1.71 from Escherichia coli | 29% id, 97% cov |
ASTD_SALTY / Q8ZPV0: N-succinylglutamate 5-semialdehyde dehydrogenase; Succinylglutamic semialdehyde dehydrogenase; SGSD; EC 1.2.1.71 from Salmonella typhimurium | 28% id, 97% cov |
| Shew_0615: bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase (RefSeq) is similar to: | PaperBLAST |
PfGW456L13_1974: Succinylglutamic semialdehyde dehydrogenase (EC 1.2.1.71) from Pseudomonas fluorescens | 30% id, 91% cov |
Sama_3009: Succinylglutamic semialdehyde dehydrogenase (EC 1.2.1.71) from Shewanella amazonensis | 29% id, 92% cov |
ASTD_ECOLI / P76217: N-succinylglutamate 5-semialdehyde dehydrogenase; Succinylglutamic semialdehyde dehydrogenase; SGSD; EC 1.2.1.71 from Escherichia coli | 29% id, 91% cov |
| Shew_1668: methylmalonate-semialdehyde dehydrogenase (RefSeq) is similar to: | PaperBLAST |
Sama_3009: Succinylglutamic semialdehyde dehydrogenase (EC 1.2.1.71) from Shewanella amazonensis | 28% id, 94% cov |
SO0619: Succinylglutamic semialdehyde dehydrogenase (EC 1.2.1.71) from Shewanella oneidensis | 27% id, 94% cov |
ASTD_SALTY / Q8ZPV0: N-succinylglutamate 5-semialdehyde dehydrogenase; Succinylglutamic semialdehyde dehydrogenase; SGSD; EC 1.2.1.71 from Salmonella typhimurium | 28% id, 87% cov |
| Shew_3103: aldehyde dehydrogenase (RefSeq) is similar to: | PaperBLAST |
ASTD_ECOLI / P76217: N-succinylglutamate 5-semialdehyde dehydrogenase; Succinylglutamic semialdehyde dehydrogenase; SGSD; EC 1.2.1.71 from Escherichia coli | 29% id, 85% cov |
ASTD_SALTY / Q8ZPV0: N-succinylglutamate 5-semialdehyde dehydrogenase; Succinylglutamic semialdehyde dehydrogenase; SGSD; EC 1.2.1.71 from Salmonella typhimurium | 28% id, 83% cov |
PfGW456L13_1974: Succinylglutamic semialdehyde dehydrogenase (EC 1.2.1.71) from Pseudomonas fluorescens | 27% id, 83% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 8 reading frames. These were all redundant with annotated proteins.
Lawrence Berkeley National Laboratory