Searching in Shewanella loihica PV-4 (PV4)
Found 4 curated entries in PaperBLAST's database that match '1.2.1.85' as complete word(s).
These curated entries have 3 distinct sequences.
Running ublast with E ≤ 0.01
Found 8 relevant proteins in Shewanella loihica PV-4, or try another query
| Shew_3574: aldehyde dehydrogenase (RefSeq) is similar to: | PaperBLAST |
praB / C4TP02: 2-hydroxymuconate-6-semialdehyde dehydrogenase (EC 1.2.1.85) from Paenibacillus sp. | 39% id, 97% cov |
XYLG_PSEPU / P23105: 2-hydroxymuconic semialdehyde dehydrogenase; HMSD; EC 1.2.1.85 from Pseudomonas putida | 37% id, 99% cov |
Q1XGK8: 2-hydroxymuconate-6-semialdehyde dehydrogenase (EC 1.2.1.85) from Pseudomonas putida | 36% id, 99% cov |
| Shew_0967: aldehyde dehydrogenase (RefSeq) is similar to: | PaperBLAST |
praB / C4TP02: 2-hydroxymuconate-6-semialdehyde dehydrogenase (EC 1.2.1.85) from Paenibacillus sp. | 38% id, 97% cov |
Q1XGK8: 2-hydroxymuconate-6-semialdehyde dehydrogenase (EC 1.2.1.85) from Pseudomonas putida | 36% id, 99% cov |
XYLG_PSEPU / P23105: 2-hydroxymuconic semialdehyde dehydrogenase; HMSD; EC 1.2.1.85 from Pseudomonas putida | 34% id, 99% cov |
| Shew_3173: succinic semialdehyde dehydrogenase (RefSeq) is similar to: | PaperBLAST |
praB / C4TP02: 2-hydroxymuconate-6-semialdehyde dehydrogenase (EC 1.2.1.85) from Paenibacillus sp. | 38% id, 97% cov |
XYLG_PSEPU / P23105: 2-hydroxymuconic semialdehyde dehydrogenase; HMSD; EC 1.2.1.85 from Pseudomonas putida | 34% id, 99% cov |
Q1XGK8: 2-hydroxymuconate-6-semialdehyde dehydrogenase (EC 1.2.1.85) from Pseudomonas putida | 34% id, 99% cov |
| Shew_0580: succinylglutamic semialdehyde dehydrogenase (RefSeq) is similar to: | PaperBLAST |
XYLG_PSEPU / P23105: 2-hydroxymuconic semialdehyde dehydrogenase; HMSD; EC 1.2.1.85 from Pseudomonas putida | 32% id, 98% cov |
Q1XGK8: 2-hydroxymuconate-6-semialdehyde dehydrogenase (EC 1.2.1.85) from Pseudomonas putida | 31% id, 98% cov |
praB / C4TP02: 2-hydroxymuconate-6-semialdehyde dehydrogenase (EC 1.2.1.85) from Paenibacillus sp. | 31% id, 95% cov |
| Shew_1668: methylmalonate-semialdehyde dehydrogenase (RefSeq) is similar to: | PaperBLAST |
praB / C4TP02: 2-hydroxymuconate-6-semialdehyde dehydrogenase (EC 1.2.1.85) from Paenibacillus sp. | 32% id, 97% cov |
Q1XGK8: 2-hydroxymuconate-6-semialdehyde dehydrogenase (EC 1.2.1.85) from Pseudomonas putida | 30% id, 99% cov |
XYLG_PSEPU / P23105: 2-hydroxymuconic semialdehyde dehydrogenase; HMSD; EC 1.2.1.85 from Pseudomonas putida | 30% id, 99% cov |
| Shew_0965: methylmalonate-semialdehyde dehydrogenase (RefSeq) is similar to: | PaperBLAST |
XYLG_PSEPU / P23105: 2-hydroxymuconic semialdehyde dehydrogenase; HMSD; EC 1.2.1.85 from Pseudomonas putida | 30% id, 100% cov |
Q1XGK8: 2-hydroxymuconate-6-semialdehyde dehydrogenase (EC 1.2.1.85) from Pseudomonas putida | 29% id, 100% cov |
praB / C4TP02: 2-hydroxymuconate-6-semialdehyde dehydrogenase (EC 1.2.1.85) from Paenibacillus sp. | 30% id, 96% cov |
| Shew_0615: bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase (RefSeq) is similar to: | PaperBLAST |
praB / C4TP02: 2-hydroxymuconate-6-semialdehyde dehydrogenase (EC 1.2.1.85) from Paenibacillus sp. | 28% id, 99% cov |
Q1XGK8: 2-hydroxymuconate-6-semialdehyde dehydrogenase (EC 1.2.1.85) from Pseudomonas putida | 29% id, 97% cov |
XYLG_PSEPU / P23105: 2-hydroxymuconic semialdehyde dehydrogenase; HMSD; EC 1.2.1.85 from Pseudomonas putida | 28% id, 97% cov |
| Shew_3103: aldehyde dehydrogenase (RefSeq) is similar to: | PaperBLAST |
XYLG_PSEPU / P23105: 2-hydroxymuconic semialdehyde dehydrogenase; HMSD; EC 1.2.1.85 from Pseudomonas putida | 30% id, 82% cov |
Q1XGK8: 2-hydroxymuconate-6-semialdehyde dehydrogenase (EC 1.2.1.85) from Pseudomonas putida | 30% id, 70% cov |
praB / C4TP02: 2-hydroxymuconate-6-semialdehyde dehydrogenase (EC 1.2.1.85) from Paenibacillus sp. | 30% id, 69% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 8 reading frames. These were all redundant with annotated proteins.
Lawrence Berkeley National Laboratory