Searching in Shewanella loihica PV-4 (PV4)
Found 3 curated entries in PaperBLAST's database that match '1.3.8.10' as complete word(s).
These curated entries have 2 distinct sequences.
Running ublast with E ≤ 0.01
Found 8 relevant proteins in Shewanella loihica PV-4, or try another query
| Shew_2570: acyl-CoA dehydrogenase domain-containing protein (RefSeq) is similar to: | PaperBLAST |
Q39QF5: cyclohex-1-ene-1-carbonyl-CoA dehydrogenase (EC 1.3.8.10) from Geobacter metallireducens | 39% id, 99% cov |
CH1CO_SYNAS / Q2LQN9: Cyclohex-1-ene-1-carbonyl-CoA dehydrogenase; Ch1CoA; EC 1.3.8.10 from Syntrophus aciditrophicus | 38% id, 94% cov |
| Shew_1669: butyryl-CoA dehydrogenase (RefSeq) is similar to: | PaperBLAST |
Q39QF5: cyclohex-1-ene-1-carbonyl-CoA dehydrogenase (EC 1.3.8.10) from Geobacter metallireducens | 37% id, 99% cov |
CH1CO_SYNAS / Q2LQN9: Cyclohex-1-ene-1-carbonyl-CoA dehydrogenase; Ch1CoA; EC 1.3.8.10 from Syntrophus aciditrophicus | 39% id, 91% cov |
| Shew_0900: acyl-CoA dehydrogenase domain-containing protein (RefSeq) is similar to: | PaperBLAST |
Q39QF5: cyclohex-1-ene-1-carbonyl-CoA dehydrogenase (EC 1.3.8.10) from Geobacter metallireducens | 31% id, 98% cov |
| Shew_2675: crotonobetainyl-CoA dehydrogenase (RefSeq) is similar to: | PaperBLAST |
Q39QF5: cyclohex-1-ene-1-carbonyl-CoA dehydrogenase (EC 1.3.8.10) from Geobacter metallireducens | 30% id, 99% cov |
CH1CO_SYNAS / Q2LQN9: Cyclohex-1-ene-1-carbonyl-CoA dehydrogenase; Ch1CoA; EC 1.3.8.10 from Syntrophus aciditrophicus | 27% id, 91% cov |
| Shew_1961: acyl-CoA dehydrogenase domain-containing protein (RefSeq) is similar to: | PaperBLAST |
Q39QF5: cyclohex-1-ene-1-carbonyl-CoA dehydrogenase (EC 1.3.8.10) from Geobacter metallireducens | 29% id, 96% cov |
CH1CO_SYNAS / Q2LQN9: Cyclohex-1-ene-1-carbonyl-CoA dehydrogenase; Ch1CoA; EC 1.3.8.10 from Syntrophus aciditrophicus | 30% id, 81% cov |
| Shew_2868: acyl-CoA dehydrogenase domain-containing protein (RefSeq) is similar to: | PaperBLAST |
Q39QF5: cyclohex-1-ene-1-carbonyl-CoA dehydrogenase (EC 1.3.8.10) from Geobacter metallireducens | 28% id, 99% cov |
CH1CO_SYNAS / Q2LQN9: Cyclohex-1-ene-1-carbonyl-CoA dehydrogenase; Ch1CoA; EC 1.3.8.10 from Syntrophus aciditrophicus | 29% id, 82% cov |
| Shew_2860: acyl-CoA dehydrogenase domain-containing protein (RefSeq) is similar to: | PaperBLAST |
CH1CO_SYNAS / Q2LQN9: Cyclohex-1-ene-1-carbonyl-CoA dehydrogenase; Ch1CoA; EC 1.3.8.10 from Syntrophus aciditrophicus | 29% id, 92% cov |
| Shew_2164: acyl-CoA dehydrogenase domain-containing protein (RefSeq) is similar to: | PaperBLAST |
CH1CO_SYNAS / Q2LQN9: Cyclohex-1-ene-1-carbonyl-CoA dehydrogenase; Ch1CoA; EC 1.3.8.10 from Syntrophus aciditrophicus | 29% id, 82% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 8 reading frames. These were all redundant with annotated proteins.
Lawrence Berkeley National Laboratory