Searching in Shewanella loihica PV-4 (PV4)
Found 108 curated entries in PaperBLAST's database that match '1.4.1.2'.
These curated entries have 87 distinct sequences.
Running ublast with E ≤ 0.01
Found 10 relevant proteins in Shewanella loihica PV-4, or try another query
| Shew_3429: dihydrolipoamide dehydrogenase (RefSeq) is similar to: | PaperBLAST |
P0A9P0: pyruvate dehydrogenase system (EC 1.2.1.104); 2-oxoglutarate dehydrogenase system (subunit 1/3) (EC 1.2.1.105); glycine cleavage system (EC 1.4.1.27); dihydrolipoyl dehydrogenase (EC 1.8.1.4) from Escherichia coli | 86% id, 100% cov |
P09622: pyruvate dehydrogenase system (subunit 1/5) (EC 1.2.1.104); 2-oxoglutarate dehydrogenase system (subunit 1/3) (EC 1.2.1.105); glycine cleavage system (subunit 1/4) (EC 1.4.1.27); dihydrolipoyl dehydrogenase (EC 1.8.1.4); dihydrolipoyllysine-residue (2-methylpropanoyl)transferase (EC 2.3.1.168) from Homo sapiens | 43% id, 91% cov |
P31023: pyruvate dehydrogenase system (subunit 1/3) (EC 1.2.1.104); glycine cleavage system (subunit 4/4) (EC 1.4.1.27) from Pisum sativum | 42% id, 92% cov |
| Shew_3063: glycine cleavage system protein H (RefSeq) is similar to: | PaperBLAST |
P0A6T9: glycine cleavage system (subunit 2/3) (EC 1.4.1.27) from Escherichia coli | 74% id, 100% cov |
gcvH / P73560: glycine cleavage system H-protein (EC 1.4.1.27) from Synechocystis sp. | 45% id, 94% cov |
P16048: glycine cleavage system (subunit 2/4) (EC 1.4.1.27) from Pisum sativum | 50% id, 78% cov |
| Shew_3064: glycine cleavage system aminomethyltransferase T (RefSeq) is similar to: | PaperBLAST |
P27248: glycine cleavage system (subunit 3/3) (EC 1.4.1.27) from Escherichia coli | 68% id, 99% cov |
Q5NHP0: glycine cleavage system (EC 1.4.1.27) from Francisella tularensis | 52% id, 99% cov |
Q9WY54: glycine cleavage system (EC 1.4.1.27) from Thermotoga maritima | 42% id, 98% cov |
| Shew_3062: glycine dehydrogenase (RefSeq) is similar to: | PaperBLAST |
P33195: glycine cleavage system (subunit 1/3) (EC 1.4.1.27) from Escherichia coli | 67% id, 100% cov |
Q94B78: glycine cleavage system (subunit 4/5) (EC 1.4.1.27) from Arabidopsis thaliana | 54% id, 93% cov |
P26969: glycine cleavage system (subunit 3/4) (EC 1.4.1.27) from Pisum sativum | 55% id, 91% cov |
| Shew_1809: NAD-glutamate dehydrogenase (RefSeq) is similar to: | PaperBLAST |
DHE2_PSEAE / Q9HZE0: NAD-specific glutamate dehydrogenase; NAD-GDH; NAD(+)-dependent glutamate dehydrogenase; EC 1.4.1.2 from Pseudomonas aeruginosa | 48% id, 97% cov |
DHE2_HALED / E1V4J5: NAD-specific glutamate dehydrogenase; NAD-GDH; NAD(+)-dependent glutamate dehydrogenase; EC 1.4.1.2 from Halomonas elongata | 47% id, 99% cov |
AZOBR_RS00190: L-glutamate dehydrogenase (NAD+) (EC 1.4.1.2) from Azospirillum brasilense | 46% id, 100% cov |
| Shew_1555: Glu/Leu/Phe/Val dehydrogenase, dimerisation region (RefSeq) is similar to: | PaperBLAST |
DHPH_LYSSH / P23307: Phenylalanine dehydrogenase; PheDH; EC 1.4.1.20 from Lysinibacillus sphaericus | 48% id, 91% cov |
VDH_STRCO / Q06539: Valine dehydrogenase; ValDH; EC 1.4.1.23 from Streptomyces coelicolor | 45% id, 93% cov |
DHPH_CALTT / F5L9G2: Phenylalanine dehydrogenase; PheDH; EC 1.4.1.20 from Caldalkalibacillus thermarum | 45% id, 92% cov |
| Shew_3660: glutathione reductase (RefSeq) is similar to: | PaperBLAST |
P09622: pyruvate dehydrogenase system (subunit 1/5) (EC 1.2.1.104); 2-oxoglutarate dehydrogenase system (subunit 1/3) (EC 1.2.1.105); glycine cleavage system (subunit 1/4) (EC 1.4.1.27); dihydrolipoyl dehydrogenase (EC 1.8.1.4); dihydrolipoyllysine-residue (2-methylpropanoyl)transferase (EC 2.3.1.168) from Homo sapiens | 30% id, 89% cov |
P31023: pyruvate dehydrogenase system (subunit 1/3) (EC 1.2.1.104); glycine cleavage system (subunit 4/4) (EC 1.4.1.27) from Pisum sativum | 29% id, 89% cov |
P0A9P0: pyruvate dehydrogenase system (EC 1.2.1.104); 2-oxoglutarate dehydrogenase system (subunit 1/3) (EC 1.2.1.105); glycine cleavage system (EC 1.4.1.27); dihydrolipoyl dehydrogenase (EC 1.8.1.4) from Escherichia coli | 28% id, 92% cov |
| Shew_2955: ornithine cyclodeaminase (RefSeq) is similar to: | PaperBLAST |
DAUB_PSEAE / Q9HXE4: NAD(P)H-dependent anabolic L-arginine dehydrogenase DauB; EC 1.4.1.25 from Pseudomonas aeruginosa | 25% id, 97% cov |
| Shew_0729: FAD-dependent pyridine nucleotide-disulphide oxidoreductase (RefSeq) is similar to: | PaperBLAST |
P31023: pyruvate dehydrogenase system (subunit 1/3) (EC 1.2.1.104); glycine cleavage system (subunit 4/4) (EC 1.4.1.27) from Pisum sativum | 23% id, 82% cov |
P72740: glycine cleavage system (subunit 2/2) (EC 1.4.1.27) from Synechocystis sp. | 24% id, 69% cov |
P0A9P0: pyruvate dehydrogenase system (EC 1.2.1.104); 2-oxoglutarate dehydrogenase system (subunit 1/3) (EC 1.2.1.105); glycine cleavage system (EC 1.4.1.27); dihydrolipoyl dehydrogenase (EC 1.8.1.4) from Escherichia coli | 24% id, 70% cov |
| Shew_0591: glucose-methanol-choline oxidoreductase (RefSeq) is similar to: | PaperBLAST |
P09622: pyruvate dehydrogenase system (subunit 1/5) (EC 1.2.1.104); 2-oxoglutarate dehydrogenase system (subunit 1/3) (EC 1.2.1.105); glycine cleavage system (subunit 1/4) (EC 1.4.1.27); dihydrolipoyl dehydrogenase (EC 1.8.1.4); dihydrolipoyllysine-residue (2-methylpropanoyl)transferase (EC 2.3.1.168) from Homo sapiens | 37% id, 10% cov |
O08749: glycine cleavage system (subunit 1/2) (EC 1.4.1.27) from Mus musculus | 49% id, 7% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 9 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.
| 3503503-3504456 (frame +1) on 113993 is similar to: | PaperBLAST |
DAUB_PSEAE / Q9HXE4: NAD(P)H-dependent anabolic L-arginine dehydrogenase DauB; EC 1.4.1.25 from Pseudomonas aeruginosa | 25% id, 99% cov |
Lawrence Berkeley National Laboratory