Curated BLAST

Curated BLAST for Genomes

Curated BLAST

Searching in Shewanella loihica PV-4 (PV4)

Found 33 curated entries in PaperBLAST's database that match '1.5.1.2' as complete word(s).

These curated entries have 27 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Shewanella loihica PV-4, or try another query

Shew_1136: pyrroline-5-carboxylate reductase (RefSeq) is similar to:	PaperBLAST
Shew_1136: pyrroline-5-carboxylate reductase (EC 1.5.1.2) from Shewanella loihica	100% id, 100% cov
P5CR_PSEAE / P22008: Pyrroline-5-carboxylate reductase; P5C reductase; P5CR; PCA reductase; EC 1.5.1.2 from Pseudomonas aeruginosa	39% id, 99% cov
P5CR_ECOLI / P0A9L8: Pyrroline-5-carboxylate reductase; P5C reductase; P5CR; PCA reductase; EC 1.5.1.2 from Escherichia coli ProC / b0386: pyrroline-5-carboxylate reductase (EC 1.5.1.2) from Escherichia coli proC / P0A9L8: pyrroline-5-carboxylate reductase (EC 1.5.1.2) from Escherichia coli	37% id, 100% cov
O87725: pyrroline-5-carboxylate reductase (EC 1.5.1.2) from Acetoanaerobium sticklandii	36% id, 100% cov
Q4DH60: pyrroline-5-carboxylate reductase (EC 1.5.1.2) from Trypanosoma cruzi	36% id, 98% cov
P5CR_METAC / Q9HH99: Pyrroline-5-carboxylate reductase; P5C reductase; P5CR; PCA reductase; EC 1.5.1.2 from Methanosarcina acetivorans	34% id, 100% cov
P5CR2_BACSU / P54552: Pyrroline-5-carboxylate reductase 2; P5C reductase 2; P5CR 2; PCA reductase 2; EC 1.5.1.2 from Bacillus subtilis	34% id, 97% cov
DvMF_3161: pyrroline-5-carboxylate reductase (EC 1.5.1.2) from Desulfovibrio vulgaris	33% id, 97% cov
DVU2332: pyrroline-5-carboxylate reductase (EC 1.5.1.2) from Desulfovibrio vulgaris	32% id, 100% cov
PROC1 / F2E7Q2: pyrroline-5-carboxylate reductase (EC 1.5.1.2) from Hordeum vulgare	33% id, 96% cov
G7KRM5: pyrroline-5-carboxylate reductase (EC 1.5.1.2) from Medicago truncatula	33% id, 95% cov
P5CR1_MOUSE / Q922W5: Pyrroline-5-carboxylate reductase 1, mitochondrial; P5C reductase 1; P5CR 1; EC 1.5.1.2 from Mus musculus	35% id, 86% cov
CCNA_00528: pyrroline-5-carboxylate reductase (EC 1.5.1.2) from Caulobacter crescentus	30% id, 98% cov
P5CR1_BACSU / P0CI77: Pyrroline-5-carboxylate reductase 1; P5C reductase 1; P5CR 1; PCA reductase 1; EC 1.5.1.2 from Bacillus subtilis	32% id, 91% cov
CA265_RS18505: pyrroline-5-carboxylate reductase (EC 1.5.1.2) from Pedobacter sp.	31% id, 91% cov
P5CR1_HUMAN / P32322: Pyrroline-5-carboxylate reductase 1, mitochondrial; P5C reductase 1; P5CR 1; EC 1.5.1.2 from Homo sapiens PYCR1 / P32322: pyrroline-5-carboxylate reductase 1 subunit (EC 1.5.1.2) from Homo sapiens P32322: pyrroline-5-carboxylate reductase (EC 1.5.1.2) from Homo sapiens	33% id, 84% cov
F4K884: pyrroline-5-carboxylate reductase (EC 1.5.1.2) from Arabidopsis thaliana	30% id, 91% cov
P5CR2_HUMAN / Q96C36: Pyrroline-5-carboxylate reductase 2; P5C reductase 2; P5CR 2; EC 1.5.1.2 from Homo sapiens Q96C36: pyrroline-5-carboxylate reductase (EC 1.5.1.2) from Homo sapiens	33% id, 83% cov
Q97ZT3: pyrroline-5-carboxylate reductase (EC 1.5.1.2) from Saccharolobus solfataricus	28% id, 96% cov
P5CR_TREPA / P27771: Pyrroline-5-carboxylate reductase; P5C reductase; P5CR; PCA reductase; EC 1.5.1.2 from Treponema pallidum	27% id, 100% cov
Q5NQR9: pyrroline-5-carboxylate reductase (EC 1.5.1.2) from Zymomonas mobilis	26% id, 98% cov
More...

Shew_3016: pyrroline-5-carboxylate reductase (RefSeq) is similar to:	PaperBLAST
Shew_1136: pyrroline-5-carboxylate reductase (EC 1.5.1.2) from Shewanella loihica	40% id, 94% cov
P5CR_PSEAE / P22008: Pyrroline-5-carboxylate reductase; P5C reductase; P5CR; PCA reductase; EC 1.5.1.2 from Pseudomonas aeruginosa	40% id, 93% cov
Q4DH60: pyrroline-5-carboxylate reductase (EC 1.5.1.2) from Trypanosoma cruzi	32% id, 94% cov
P5CR2_BACSU / P54552: Pyrroline-5-carboxylate reductase 2; P5C reductase 2; P5CR 2; PCA reductase 2; EC 1.5.1.2 from Bacillus subtilis	33% id, 91% cov
PROC1 / F2E7Q2: pyrroline-5-carboxylate reductase (EC 1.5.1.2) from Hordeum vulgare	32% id, 92% cov
P5CR_METAC / Q9HH99: Pyrroline-5-carboxylate reductase; P5C reductase; P5CR; PCA reductase; EC 1.5.1.2 from Methanosarcina acetivorans	31% id, 94% cov
P5CR_ECOLI / P0A9L8: Pyrroline-5-carboxylate reductase; P5C reductase; P5CR; PCA reductase; EC 1.5.1.2 from Escherichia coli ProC / b0386: pyrroline-5-carboxylate reductase (EC 1.5.1.2) from Escherichia coli proC / P0A9L8: pyrroline-5-carboxylate reductase (EC 1.5.1.2) from Escherichia coli	30% id, 95% cov
O87725: pyrroline-5-carboxylate reductase (EC 1.5.1.2) from Acetoanaerobium sticklandii	29% id, 95% cov
G7KRM5: pyrroline-5-carboxylate reductase (EC 1.5.1.2) from Medicago truncatula	28% id, 93% cov
CCNA_00528: pyrroline-5-carboxylate reductase (EC 1.5.1.2) from Caulobacter crescentus	33% id, 78% cov
P5CR2_HUMAN / Q96C36: Pyrroline-5-carboxylate reductase 2; P5C reductase 2; P5CR 2; EC 1.5.1.2 from Homo sapiens Q96C36: pyrroline-5-carboxylate reductase (EC 1.5.1.2) from Homo sapiens	31% id, 81% cov
P5CR1_MOUSE / Q922W5: Pyrroline-5-carboxylate reductase 1, mitochondrial; P5C reductase 1; P5CR 1; EC 1.5.1.2 from Mus musculus	30% id, 83% cov
F4K884: pyrroline-5-carboxylate reductase (EC 1.5.1.2) from Arabidopsis thaliana	28% id, 87% cov
P5CR_KLULA / Q6CR99: Pyrroline-5-carboxylate reductase; P5C reductase; P5CR; EC 1.5.1.2 from Kluyveromyces lactis	33% id, 73% cov
P5CR_YEAST / P32263: Pyrroline-5-carboxylate reductase; P5C reductase; P5CR; EC 1.5.1.2 from Saccharomyces cerevisiae PRO3 / P32263: pyrroline-5-carboxylate reductase subunit (EC 1.5.1.2) from Saccharomyces cerevisiae	28% id, 86% cov
Q5NQR9: pyrroline-5-carboxylate reductase (EC 1.5.1.2) from Zymomonas mobilis	25% id, 94% cov
P5CR1_HUMAN / P32322: Pyrroline-5-carboxylate reductase 1, mitochondrial; P5C reductase 1; P5CR 1; EC 1.5.1.2 from Homo sapiens PYCR1 / P32322: pyrroline-5-carboxylate reductase 1 subunit (EC 1.5.1.2) from Homo sapiens P32322: pyrroline-5-carboxylate reductase (EC 1.5.1.2) from Homo sapiens	29% id, 81% cov
P5CR1_BACSU / P0CI77: Pyrroline-5-carboxylate reductase 1; P5C reductase 1; P5CR 1; PCA reductase 1; EC 1.5.1.2 from Bacillus subtilis	26% id, 86% cov
More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory