Searching in Shewanella loihica PV-4 (PV4)
Found 7 curated entries in PaperBLAST's database that match '1.5.3.7' as complete word(s).
These curated entries have 6 distinct sequences.
Running ublast with E ≤ 0.01
Found 5 relevant proteins in Shewanella loihica PV-4, or try another query
| Shew_0977: FAD dependent oxidoreductase (RefSeq) is similar to: | PaperBLAST |
amaA / Q88CC4: pipecolate oxidase (EC 1.5.3.7) from Pseudomonas putida | 29% id, 88% cov |
| Shew_0969: FAD dependent oxidoreductase (RefSeq) is similar to: | PaperBLAST |
amaA / Q88CC4: pipecolate oxidase (EC 1.5.3.7) from Pseudomonas putida | 25% id, 98% cov |
| Shew_2360: D-amino-acid dehydrogenase (RefSeq) is similar to: | PaperBLAST |
SOX_HUMAN / Q9P0Z9: Peroxisomal sarcosine oxidase; PSO; L-pipecolate oxidase; L-pipecolic acid oxidase; EC 1.5.3.1; EC 1.5.3.7 from Homo sapiens | 24% id, 43% cov |
PIPOX / Q8N6Z6: L-pipecolate oxidase (EC 1.5.3.7) from Homo sapiens | 24% id, 43% cov |
| Shew_0800: FAD dependent oxidoreductase (RefSeq) is similar to: | PaperBLAST |
amaA / Q88CC4: pipecolate oxidase (EC 1.5.3.7) from Pseudomonas putida | 39% id, 11% cov |
| Shew_2679: FAD dependent oxidoreductase (RefSeq) is similar to: | PaperBLAST |
SOX_HUMAN / Q9P0Z9: Peroxisomal sarcosine oxidase; PSO; L-pipecolate oxidase; L-pipecolic acid oxidase; EC 1.5.3.1; EC 1.5.3.7 from Homo sapiens | 35% id, 12% cov |
PIPOX / Q8N6Z6: L-pipecolate oxidase (EC 1.5.3.7) from Homo sapiens | 35% id, 12% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 3 reading frames. These were all redundant with annotated proteins.
Lawrence Berkeley National Laboratory