Curated BLAST for Genomes

 

Curated BLAST

Searching in Shewanella loihica PV-4 (PV4)

Found 34 curated entries in PaperBLAST's database that match '2.3.1.1' as complete word(s).

These curated entries have 28 distinct sequences.

Running ublast with E ≤ 0.01

Found 4 relevant proteins in Shewanella loihica PV-4, or try another query

Shew_3478: N-acetylglutamate synthase (RefSeq)
is similar to:
PaperBLAST

ARGA_ECOLI / P0A6C5: Amino-acid acetyltransferase; N-acetylglutamate synthase; AGS; NAGS; EC 2.3.1.1 from Escherichia coli
ArgA / b2818: N-acetylglutamate synthase (EC 2.3.1.1) from Escherichia coli
argA / P0A6C5: N-acetylglutamate synthase (EC 2.3.1.1) from Escherichia coli

64% id,
99% cov

P22567: amino-acid N-acetyltransferase (EC 2.3.1.1) from Pseudomonas aeruginosa

49% id,
100% cov

C4NFG1: amino-acid N-acetyltransferase (EC 2.3.1.1) from Solanum lycopersicum

33% id,
47% cov

More...

Shew_0903: GCN5-related N-acetyltransferase (RefSeq)
is similar to:
PaperBLAST

Q9I3W7: amino-acid N-acetyltransferase (EC 2.3.1.1) from Pseudomonas aeruginosa

42% id,
94% cov

Shew_2943: ribosomal-protein-alanine acetyltransferase (RefSeq)
is similar to:
PaperBLAST

MnaT / b1448: L-amino acid N-acyltransferase (EC 2.3.1.1) from Escherichia coli
mnaT / P76112: L-amino acid N-acyltransferase (EC 2.3.1.1) from Escherichia coli

30% id,
55% cov

Shew_0203: acetylglutamate kinase (RefSeq)
is similar to:
PaperBLAST

N515DRAFT_3768: N-acetylglutamate synthase; N-acetylglutamate kinase (EC 2.3.1.1; EC 2.7.2.8) from Dyella japonica

27% id,
57% cov

Q87EL2: amino-acid N-acetyltransferase (EC 2.3.1.1) from Xylella fastidiosa

25% id,
60% cov

Q0ASS9: amino-acid N-acetyltransferase (EC 2.3.1.1); acetylglutamate kinase (EC 2.7.2.8) from Maricaulis maris

27% id,
57% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 4 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory