Curated BLAST for Genomes


Curated BLAST

Searching in Shewanella loihica PV-4 (PV4)

Found 12 curated entries in PaperBLAST's database that match '' as complete word(s).

These curated entries have 8 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Shewanella loihica PV-4, or try another query

Shew_0579: arginine N-succinyltransferase (RefSeq)
is similar to:

Sama_3010: Arginine N-succinyltransferase (EC from Shewanella amazonensis

84% id,
100% cov

Shewana3_0611: Arginine N-succinyltransferase (EC from Shewanella sp.

83% id,
100% cov

ASTA_SALTY / Q8ZPV1: Arginine N-succinyltransferase; AST; AOST; EC from Salmonella typhimurium

45% id,
98% cov


The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory