Curated BLAST for Genomes

 

Curated BLAST

Searching in Shewanella loihica PV-4 (PV4)

Found 77 curated entries in PaperBLAST's database that match '2.3.1.31' as complete word(s).

These curated entries have 68 distinct sequences.

Running ublast with E ≤ 0.01

Found 8 relevant proteins in Shewanella loihica PV-4, or try another query

Shew_2551: homoserine O-succinyltransferase (RefSeq)
is similar to:
PaperBLAST

METAA_GEOKU / A0A0D8BWP6: Homoserine O-acetyltransferase; HAT; Homoserine transacetylase; HTA; EC 2.3.1.31 from Geobacillus kaustophilus

54% id,
99% cov

METAA_SUCHY / E8LIC0: Homoserine O-acetyltransferase; HAT; Homoserine transacetylase; HTA; EC 2.3.1.31 from Succinatimonas hippei

54% id,
99% cov

METAA_BACFN / Q5LHS7: Homoserine O-acetyltransferase; HAT; Homoserine transacetylase; HTA; EC 2.3.1.31 from Bacteroides fragilis

53% id,
100% cov

More...

Shew_1920: alpha/beta hydrolase fold (RefSeq)
is similar to:
PaperBLAST

METXA_THET2 / Q9RA51: Homoserine O-acetyltransferase; HAT; Homoserine transacetylase; HTA; EC 2.3.1.31 from Thermus thermophilus

29% id,
40% cov

Shew_1714: alpha/beta hydrolase fold (RefSeq)
is similar to:
PaperBLAST

METXA_THET2 / Q9RA51: Homoserine O-acetyltransferase; HAT; Homoserine transacetylase; HTA; EC 2.3.1.31 from Thermus thermophilus

41% id,
18% cov

METXA_TRIL1 / B3E278: Homoserine O-acetyltransferase; HAT; Homoserine transacetylase; HTA; EC 2.3.1.31 from Trichlorobacter lovleyi

29% id,
20% cov

METXA_PSYTT / K4ICC9: Homoserine O-acetyltransferase; HAT; Homoserine transacetylase; HTA; EC 2.3.1.31 from Psychroflexus torquis

33% id,
17% cov

More...

Shew_0831: CBS domain-containing protein (RefSeq)
is similar to:
PaperBLAST

METXA_METZD / F7XKY8: Homoserine O-acetyltransferase; HAT; Homoserine transacetylase; HTA; EC 2.3.1.31 from Methanosalsum zhilinae

30% id,
24% cov

METXA_METAC / Q8TME4: Homoserine O-acetyltransferase; HAT; Homoserine transacetylase; HTA; EC 2.3.1.31 from Methanosarcina acetivorans

34% id,
21% cov

METXA_METST / Q2NGH9: Homoserine O-acetyltransferase; HAT; Homoserine transacetylase; HTA; EC 2.3.1.31 from Methanosphaera stadtmanae

28% id,
24% cov

More...

Shew_3011: magnesium transporter (RefSeq)
is similar to:
PaperBLAST

METXA_METST / Q2NGH9: Homoserine O-acetyltransferase; HAT; Homoserine transacetylase; HTA; EC 2.3.1.31 from Methanosphaera stadtmanae

24% id,
27% cov

Shew_3018: alpha/beta hydrolase fold (RefSeq)
is similar to:
PaperBLAST

METXA_THET2 / Q9RA51: Homoserine O-acetyltransferase; HAT; Homoserine transacetylase; HTA; EC 2.3.1.31 from Thermus thermophilus

36% id,
15% cov

Shew_1860: alpha/beta hydrolase fold (RefSeq)
is similar to:
PaperBLAST

METXA_THET2 / Q9RA51: Homoserine O-acetyltransferase; HAT; Homoserine transacetylase; HTA; EC 2.3.1.31 from Thermus thermophilus

37% id,
14% cov

Shew_3306: KpsF/GutQ family protein (RefSeq)
is similar to:
PaperBLAST

METXA_METEZ / D7E9E0: Homoserine O-acetyltransferase; HAT; Homoserine transacetylase; HTA; EC 2.3.1.31 from Methanohalobium evestigatum

29% id,
15% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 6 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory