Curated BLAST
Searching in Shewanella loihica PV-4 (PV4)
Found 63 curated entries in PaperBLAST's database that match '2.4.2.1' as complete word(s).
These curated entries have 44 distinct sequences.
Running ublast with E ≤ 0.01
Found 5 relevant proteins in Shewanella loihica PV-4, or try another query
Shew_2812: purine nucleoside phosphorylase (RefSeq)
is similar to: | PaperBLAST |
DEOD_SALTY / Q8ZJV7: Purine nucleoside phosphorylase DeoD-type; PNP; EC 2.4.2.1 from Salmonella typhimurium | 71% id,
98% cov |
DEOD_ECOLI / P0ABP8: Purine nucleoside phosphorylase DeoD-type; PNP; EC 2.4.2.1 from Escherichia coli
Pup / b4384: purine nucleoside phosphorylase (EC 2.4.2.15; EC 2.4.2.1) from Escherichia coli
deoD / RF|NP_418801: purine nucleoside phosphorylase deoD-type; EC 2.4.2.1 from Escherichia coli
deoD / P0ABP8: purine nucleoside phosphorylase (EC 2.4.2.15; EC 2.4.2.1) from Escherichia coli | 70% id,
98% cov |
C8CPR9: purine-nucleoside phosphorylase (EC 2.4.2.1) from Pseudoalteromonas sp. | 62% id,
100% cov |
deoD: purine nucleoside phosphorylase; EC 2.4.2.1 from Bacillus anthracis | 62% id,
98% cov |
P77835: purine-nucleoside phosphorylase (EC 2.4.2.1) from Geobacillus stearothermophilus | 59% id,
98% cov |
O34925: purine-nucleoside phosphorylase (EC 2.4.2.1) from Bacillus subtilis | 58% id,
98% cov |
P56463: purine-nucleoside phosphorylase (EC 2.4.2.1) from Helicobacter pylori | 53% id,
98% cov |
DEOD_MYCGE / P47295: Purine nucleoside phosphorylase DeoD-type; PNP; EC 2.4.2.1 from Mycoplasma genitalium | 40% id,
97% cov |
Q72IR2: purine-nucleoside phosphorylase (EC 2.4.2.1) from Thermus thermophilus | 37% id,
100% cov |
PNPH_SACS2 / P50389: Purine nucleoside phosphorylase; PNP; 5'-methylthioadenosine phosphorylase I; MTA phosphorylase I; MTAPI; EC 2.4.2.1; EC 2.4.2.28 from Saccharolobus solfataricus | 34% id,
89% cov |
A0A518Y5Z2: purine-nucleoside phosphorylase (EC 2.4.2.1) from Helicobacter pylori | 52% id,
35% cov |
More... |
Shew_2949: hypothetical protein (RefSeq)
is similar to: | PaperBLAST |
PURNU_ECOLI / P33644: Purine nucleoside phosphorylase YfiH; Adenosine deaminase YfiH; Polyphenol oxidase YfiH; S-methyl-5'-thioadenosine phosphorylase YfiH; EC 2.4.2.1; EC 3.5.4.4; EC 1.10.3.-; EC 2.4.2.28 from Escherichia coli
yfiH / P33644: purine nucleoside phosphorylase YfiH (EC 2.4.2.1; EC 2.4.2.28; EC 3.5.4.4; EC 1.10.3.2) from Escherichia coli | 49% id,
98% cov |
PURNU_UNKP / Q1EIR0: Adenosine deaminase RL5; Laccase RL5; Multicopper oxidase RL5; Polyphenol oxidase; Purine nucleoside phosphorylase RL5; S-methyl-5'-thioadenosine phosphorylase RL5; EC 3.5.4.4; EC 1.10.3.-; EC 2.4.2.1; EC 2.4.2.28 from Unknown prokaryotic | 31% id,
94% cov |
PURNU_GEOS3 / P84138: Purine nucleoside phosphorylase YlmD; Adenosine deaminase YlmD; S-methyl-5'-thioadenosine phosphorylase YlmD; EC 2.4.2.1; EC 3.5.4.4; EC 2.4.2.28 from Geobacillus stearothermophilus | 30% id,
91% cov |
PURNU_BACTN / Q89ZI8: Purine nucleoside phosphorylase BT_4389; Adenosine deaminase BT_4389; S-methyl-5'-thioadenosine phosphorylase BT_4389; EC 2.4.2.1; EC 3.5.4.4; EC 2.4.2.28 from Bacteroides thetaiotaomicron | 29% id,
70% cov |
LACC1_MOUSE / Q8BZT9: Purine nucleoside phosphorylase LACC1; Adenosine deaminase LACC1; Fatty acid metabolism-immunity nexus; Guanosine phosphorylase LACC1; Laccase domain-containing protein 1; S-methyl-5'-thioadenosine phosphorylase LACC1; EC 2.4.2.1; EC 3.5.4.4; EC 2.4.2.28 from Mus musculus | 27% id,
57% cov |
LACC1_HUMAN / Q8IV20: Purine nucleoside phosphorylase LACC1; Adenosine deaminase LACC1; Fatty acid metabolism-immunity nexus; Guanosine phosphorylase LACC1; Laccase domain-containing protein 1; S-methyl-5'-thioadenosine phosphorylase LACC1; EC 2.4.2.1; EC 3.5.4.4; EC 2.4.2.28 from Homo sapiens | 27% id,
55% cov |
More... |
Shew_3390: uridine phosphorylase (RefSeq)
is similar to: | PaperBLAST |
PNPH_SACS2 / P50389: Purine nucleoside phosphorylase; PNP; 5'-methylthioadenosine phosphorylase I; MTA phosphorylase I; MTAPI; EC 2.4.2.1; EC 2.4.2.28 from Saccharolobus solfataricus | 34% id,
92% cov |
deoD: purine nucleoside phosphorylase; EC 2.4.2.1 from Bacillus anthracis | 33% id,
94% cov |
Q72IR2: purine-nucleoside phosphorylase (EC 2.4.2.1) from Thermus thermophilus | 29% id,
95% cov |
P77835: purine-nucleoside phosphorylase (EC 2.4.2.1) from Geobacillus stearothermophilus | 28% id,
98% cov |
PNP: purine nucleoside phosphorylase; EC 2.4.2.1 from Toxoplasma gondii
Q2HXR2: purine-nucleoside phosphorylase (EC 2.4.2.1) from Toxoplasma gondii | 35% id,
77% cov |
C8CPR9: purine-nucleoside phosphorylase (EC 2.4.2.1) from Pseudoalteromonas sp. | 28% id,
94% cov |
Q9YDC0: purine-nucleoside phosphorylase (EC 2.4.2.1) from Aeropyrum pernix | 31% id,
80% cov |
PNPH_PLAF7 / Q8I3X4: Purine nucleoside phosphorylase; PfPNP; S-methyl-5'-thioinosine phosphorylase; EC 2.4.2.1; EC 2.4.2.44 from Plasmodium falciparum
PNPH_PLAFA / Q8T9Z7: Purine nucleoside phosphorylase; S-methyl-5'-thioinosine phosphorylase; EC 2.4.2.1; EC 2.4.2.44 from Plasmodium falciparum
PNP / Q8T9Z7: purine nucleoside phosphorylase monomer (EC 2.4.2.44; EC 2.4.2.1) from Plasmodium falciparum
Q8I3X4: purine-nucleoside phosphorylase (EC 2.4.2.1); uridine phosphorylase (EC 2.4.2.3) from Plasmodium falciparum
Q8T9Z7: purine-nucleoside phosphorylase (EC 2.4.2.1) from Plasmodium falciparum | 30% id,
80% cov |
PNPH_PLAVS / A5K9M4: Purine nucleoside phosphorylase; PvPNP; EC 2.4.2.1 from Plasmodium vivax | 31% id,
76% cov |
More... |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 5 reading frames. These were all redundant with annotated proteins.
by Morgan Price,
Arkin group
Lawrence Berkeley National Laboratory