Curated BLAST for Genomes

 

Curated BLAST

Searching in Shewanella loihica PV-4 (PV4)

Found 332 curated entries in PaperBLAST's database that match '2.6.1.1'.

These curated entries have 227 distinct sequences.

Running ublast with E ≤ 0.01

Found 26 relevant proteins in Shewanella loihica PV-4, or try another query

Shew_1858: DegT/DnrJ/EryC1/StrS aminotransferase (RefSeq)
is similar to:
PaperBLAST

KDNA_SHEON / Q8EEB1: 8-amino-3,8-dideoxy-alpha-D-manno-octulosonate transaminase; EC 2.6.1.109 from Shewanella oneidensis
kdnA / Q8EEB1: 8-amino-3,8-dideoxy-D-manno-octulosonate transaminase (EC 2.6.1.109) from Shewanella oneidensis
Q8EEB1: 8-amino-3,8-dideoxy-alpha-D-manno-octulosonate transaminase (EC 2.6.1.109) from Shewanella oneidensis

92% id,
100% cov

GDPPS_VIBCL / Q06953: GDP-perosamine synthase; EC 2.6.1.102 from Vibrio cholerae
rfbE / Q06953: GDP-4-dehydro-6-deoxy-D-mannose-4-aminotransferase subunit (EC 2.6.1.102) from Vibrio cholerae

35% id,
81% cov

gnnB / Q6QHI5: UDP-N-acetyl-3-dehydro-α-D-glucosamine 3-aminotranferase (EC 2.6.1.122) from Acidithiobacillus ferrooxidans
Q6QHI5: UDP-N-acetyl-3-dehydro-alpha-D-glucosamine 3-aminotranferase (EC 2.6.1.122) from Acidithiobacillus ferrooxidans

32% id,
88% cov

More...

Shew_3839: glucosamine--fructose-6-phosphate aminotransferase, isomerizing (RefSeq)
is similar to:
PaperBLAST

GLMS_ECOLI / P17169: Glutamine--fructose-6-phosphate aminotransferase [isomerizing]; D-fructose-6-phosphate amidotransferase; GFAT; Glucosamine-6-phosphate synthase; Hexosephosphate aminotransferase; L-glutamine--D-fructose-6-phosphate amidotransferase; EC 2.6.1.16 from Escherichia coli
GlmS / b3729: L-glutamine—D-fructose-6-phosphate aminotransferase (EC 2.6.1.16) from Escherichia coli
glmS / PDB|2BPJ_A: glucosamine--fructose-6-phosphate aminotransferase [isomerizing]; EC 2.6.1.16 from Escherichia coli
glmS / P17169: L-glutamine—D-fructose-6-phosphate aminotransferase (EC 2.6.1.16) from Escherichia coli
P17169: glutamine-fructose-6-phosphate transaminase (isomerizing) (EC 2.6.1.16) from Escherichia coli

70% id,
100% cov

B4F0F0: glutamine-fructose-6-phosphate transaminase (isomerizing) (EC 2.6.1.16) from Proteus mirabilis

67% id,
100% cov

Q9HT25: glutamine-fructose-6-phosphate transaminase (isomerizing) (EC 2.6.1.16) from Pseudomonas aeruginosa

62% id,
100% cov

More...

Shew_0291: branched-chain amino acid aminotransferase (RefSeq)
is similar to:
PaperBLAST

IlvE / b3770: branched-chain-amino-acid aminotransferase (EC 2.6.1.1; EC 2.6.1.57; EC 2.6.1.27; EC 2.6.1.42; EC 2.6.1.6) from Escherichia coli
ilvE / P0AB80: branched-chain-amino-acid aminotransferase (EC 2.6.1.1; EC 2.6.1.42; EC 2.6.1.6) from Escherichia coli

66% id,
99% cov

Shew_0578: bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein (RefSeq)
is similar to:
PaperBLAST

ARUC_PSEAE / O30508: Succinylornithine transaminase/acetylornithine aminotransferase; ACOAT; SOAT; Succinylornithine aminotransferase; EC 2.6.1.11; EC 2.6.1.81 from Pseudomonas aeruginosa
aruC / O30508: succinylornithine transaminase subunit (EC 2.6.1.13; EC 2.6.1.11; EC 2.6.1.81) from Pseudomonas aeruginosa

64% id,
100% cov

HP15_3042: acetylornithine aminotransferase (EC 2.6.1.11); succinylornithine aminotransferase (EC 2.6.1.81) from Marinobacter adhaerens

63% id,
99% cov

ARGD_ECOLI / P18335: Acetylornithine/succinyldiaminopimelate aminotransferase; ACOAT; DapATase; Succinyldiaminopimelate transferase; EC 2.6.1.11; EC 2.6.1.17 from Escherichia coli
Dtu / b3359: N-acetylornithine aminotransferase / N-succinyldiaminopimelate aminotransferase (EC 2.6.1.11; EC 2.6.1.17) from Escherichia coli
argD / P18335: N-acetylornithine aminotransferase / N-succinyldiaminopimelate aminotransferase (EC 2.6.1.11; EC 2.6.1.17) from Escherichia coli

63% id,
98% cov

More...

Shew_1999: aromatic amino acid aminotransferase (RefSeq)
is similar to:
PaperBLAST

AAT_ECOLI / P00509: Aspartate aminotransferase; AspAT; Transaminase A; EC 2.6.1.1 from Escherichia coli
AspC / b0928: aspartate aminotransferase (EC 2.6.1.1; EC 2.6.1.57; EC 2.6.1.27; EC 2.6.1.5; EC 2.6.1.7; EC 2.6.1.3) from Escherichia coli
aspC / P00509: aspartate aminotransferase (EC 2.6.1.1; EC 2.6.1.7; EC 2.6.1.3) from Escherichia coli
P00509: aspartate transaminase (EC 2.6.1.1) from Escherichia coli
A0A140ND68: aspartate transaminase (EC 2.6.1.1) from Escherichia coli
D3H0F7: aspartate transaminase (EC 2.6.1.1) from Escherichia coli

62% id,
100% cov

aspC / Q3IED5: aspartate aminotransferase (EC 2.6.1.1) from Pseudoalteromonas translucida

53% id,
99% cov

W0PFQ7: aspartate transaminase (EC 2.6.1.1) from Advenella mimigardefordensis

49% id,
99% cov

More...

Shew_0575: glutamine amidotransferase of anthranilate synthase (RefSeq)
is similar to:
PaperBLAST

pabA / P28819: 4-amino-4-deoxychorismate synthase; anthranilate synthase (subunit II) (EC 2.6.1.123) from Bacillus subtilis

63% id,
96% cov

Shew_0966: beta alanine--pyruvate transaminase (RefSeq)
is similar to:
PaperBLAST

Q7WWK8: beta-alanine-pyruvate transaminase (EC 2.6.1.18) from Achromobacter denitrificans

61% id,
98% cov

APTA_CAUVC / Q9A3Q9: Omega-aminotransferase; Beta-alanine--pyruvate aminotransferase; EC 2.6.1.-; EC 2.6.1.18 from Caulobacter vibrioides

59% id,
100% cov

BAUA_PSEAE / Q9I700: Beta-alanine--pyruvate aminotransferase; Beta-A--Py AT; Beta-alanine--pyruvate transaminase; Omega-amino acid aminotransferase; Omega-amino acid AT; Omega-amino acid--pyruvate aminotransferase; Omega-APT; EC 2.6.1.18 from Pseudomonas aeruginosa

48% id,
100% cov

More...

Shew_1951: aromatic amino acid aminotransferase (RefSeq)
is similar to:
PaperBLAST

aspC / Q3IED5: aspartate aminotransferase (EC 2.6.1.1) from Pseudoalteromonas translucida

58% id,
99% cov

AAT_ECOLI / P00509: Aspartate aminotransferase; AspAT; Transaminase A; EC 2.6.1.1 from Escherichia coli
AspC / b0928: aspartate aminotransferase (EC 2.6.1.1; EC 2.6.1.57; EC 2.6.1.27; EC 2.6.1.5; EC 2.6.1.7; EC 2.6.1.3) from Escherichia coli
aspC / P00509: aspartate aminotransferase (EC 2.6.1.1; EC 2.6.1.7; EC 2.6.1.3) from Escherichia coli
P00509: aspartate transaminase (EC 2.6.1.1) from Escherichia coli
A0A140ND68: aspartate transaminase (EC 2.6.1.1) from Escherichia coli
D3H0F7: aspartate transaminase (EC 2.6.1.1) from Escherichia coli

50% id,
100% cov

phhC / P43336: tyrosine aminotransferase subunit (EC 2.6.1.1) from Pseudomonas aeruginosa

48% id,
98% cov

More...

Shew_1950: phosphoserine aminotransferase (RefSeq)
is similar to:
PaperBLAST

SerC / b0907: phosphoserine/phosphohydroxythreonine aminotransferase (EC 2.6.1.52; EC 2.6.1.17) from Escherichia coli
serC / P23721: phosphoserine/phosphohydroxythreonine aminotransferase (EC 2.6.1.52; EC 2.6.1.17) from Escherichia coli

58% id,
100% cov

Shew_3172: 4-aminobutyrate aminotransferase (RefSeq)
is similar to:
PaperBLAST

PUUE_ECOLI / P50457: 4-aminobutyrate aminotransferase PuuE; GABA aminotransferase; GABA-AT; Gamma-amino-N-butyrate transaminase; GABA transaminase; Glutamate:succinic semialdehyde transaminase; EC 2.6.1.19 from Escherichia coli
GoaG / b1302: 4-aminobutyrate aminotransferase PuuE (EC 2.6.1.19; EC 2.6.1.48) from Escherichia coli
puuE / P50457: 4-aminobutyrate aminotransferase PuuE (EC 2.6.1.19; EC 2.6.1.48) from Escherichia coli

56% id,
100% cov

A0A5B8KQ12: 4-aminobutyrate-2-oxoglutarate transaminase (EC 2.6.1.19) from Agrobacterium tumefaciens

58% id,
97% cov

gabT / Q0K2K2: 4-aminobutyrate aminotransferase monomer (EC 2.6.1.19) from Cupriavidus necator
Q0K2K2: 4-aminobutyrate-2-oxoglutarate transaminase (EC 2.6.1.19) from Cupriavidus necator

57% id,
98% cov

More...

Shew_2252: anthranilate synthase component II (RefSeq)
is similar to:
PaperBLAST

pabA / P28819: 4-amino-4-deoxychorismate synthase; anthranilate synthase (subunit II) (EC 2.6.1.123) from Bacillus subtilis

44% id,
96% cov

Shew_1718: adenosylmethionine-8-amino-7-oxononanoate aminotransferase (RefSeq)
is similar to:
PaperBLAST

BIOK_BACSU / P53555: L-Lysine--8-amino-7-oxononanoate transaminase; 7,8-diamino-pelargonic acid aminotransferase; DAPA AT; DAPA aminotransferase; 7,8-diaminononanoate synthase; DANS; Diaminopelargonic acid synthase; L-Lysine--8-amino-7-oxononanoate aminotransferase; EC 2.6.1.105 from Bacillus subtilis
bioK / P53555: lysine-8-amino-7-oxononanoate aminotransferase (EC 2.6.1.105) from Bacillus subtilis
P53555: lysine-8-amino-7-oxononanoate transaminase (EC 2.6.1.105) from Bacillus subtilis

35% id,
98% cov

AstC / b1748: succinylornithine transaminase (EC 2.6.1.81; EC 2.6.1.11) from Escherichia coli
astC / P77581: succinylornithine transaminase (EC 2.6.1.81; EC 2.6.1.11) from Escherichia coli

32% id,
97% cov

APTA_CAUVC / Q9A3Q9: Omega-aminotransferase; Beta-alanine--pyruvate aminotransferase; EC 2.6.1.-; EC 2.6.1.18 from Caulobacter vibrioides

31% id,
97% cov

More...

Shew_0294: alanine--glyoxylate transaminase (RefSeq)
is similar to:
PaperBLAST

serC / Q58369: phosphoserine aminotransferase monomer (EC 2.6.1.1; EC 2.6.1.52) from Methanocaldococcus jannaschii

36% id,
94% cov

PUCG_BACSU / O32148: (S)-ureidoglycine--glyoxylate transaminase; UGXT; (S)-ureidoglycine--glyoxylate aminotransferase; Purine catabolism protein PucG; EC 2.6.1.112 from Bacillus subtilis

37% id,
91% cov

D8V0F7: (S)-ureidoglycine-glyoxylate transaminase (EC 2.6.1.112) from Bacillus subtilis

37% id,
90% cov

More...

Shew_2251: anthranilate synthase component I (RefSeq)
is similar to:
PaperBLAST

B2FR92: 4-amino-4-deoxychorismate synthase (2-amino-4-deoxychorismate-forming) (EC 2.6.1.123) from Stenotrophomonas maltophilia

33% id,
100% cov

pabB / P28820: 4-amino-4-deoxychorismate synthase (para-aminobenzoate synthase) (EC 2.6.1.123) from Bacillus subtilis
P28820: 4-amino-4-deoxychorismate synthase (2-amino-4-deoxychorismate-forming) (EC 2.6.1.123); aminodeoxychorismate synthase (EC 2.6.1.85) from Bacillus subtilis

35% id,
89% cov

Shew_1012: glutamate-1-semialdehyde-2,1-aminomutase (RefSeq)
is similar to:
PaperBLAST

D1C218: beta-alanine-pyruvate transaminase (EC 2.6.1.18) from Sphaerobacter thermophilus

35% id,
94% cov

KAT_CLOAI / B0VH76: 3-aminobutyryl-CoA aminotransferase; HemL-like protein; EC 2.6.1.111 from Cloacimonas acidaminovorans
B0VH76: 3-aminobutanoyl-CoA transaminase (EC 2.6.1.111) from Candidatus Cloacimonas

32% id,
98% cov

gabT / Q4KKA1: 4-aminobutyrate transaminase subunit (EC 2.6.1.19) from Pseudomonas fluorescens

34% id,
80% cov

More...

Shew_1903: para-aminobenzoate synthase, subunit I (RefSeq)
is similar to:
PaperBLAST

pabB / P28820: 4-amino-4-deoxychorismate synthase (para-aminobenzoate synthase) (EC 2.6.1.123) from Bacillus subtilis
P28820: 4-amino-4-deoxychorismate synthase (2-amino-4-deoxychorismate-forming) (EC 2.6.1.123); aminodeoxychorismate synthase (EC 2.6.1.85) from Bacillus subtilis

35% id,
90% cov

B2FR92: 4-amino-4-deoxychorismate synthase (2-amino-4-deoxychorismate-forming) (EC 2.6.1.123) from Stenotrophomonas maltophilia

32% id,
95% cov

Shew_1319: DegT/DnrJ/EryC1/StrS aminotransferase (RefSeq)
is similar to:
PaperBLAST

GDPPS_CAUVC / Q9A9H3: GDP-perosamine synthase; EC 2.6.1.102 from Caulobacter vibrioides
Q9A9H3: GDP-perosamine synthase (EC 2.6.1.102) from Caulobacter vibrioides

35% id,
89% cov

eryCI / P14290: dTDP-3-oxo-3,4,6-trideoxy-α-D-glucopyranose transaminase monomer (EC 2.6.1.106) from Saccharopolyspora erythraea

32% id,
95% cov

GDPPS_ECO57 / Q7DBF3: GDP-perosamine synthase; EC 2.6.1.102 from Escherichia coli
perA / Q7DBF3: GDP-perosamine synthase monomer (EC 2.6.1.102) from Escherichia coli

30% id,
97% cov

More...

Shew_2199: histidinol-phosphate aminotransferase (RefSeq)
is similar to:
PaperBLAST

hisC / P17731: histidinol-phosphate aminotransferase; tyrosine/phenylalanine aminotransferase (promiscuous) (EC 2.6.1.1; EC 2.6.1.9) from Bacillus subtilis

30% id,
98% cov

Shew_1914: aminotransferase AlaT (RefSeq)
is similar to:
PaperBLAST

aspB / GB|CAB14153.1: aspartate transaminase; EC 2.6.1.1 from Bacillus subtilis

30% id,
96% cov

A0A6F8T0V6: aspartate transaminase (EC 2.6.1.1) from Geobacillus sp.

30% id,
95% cov

aspC / GB|CAA63799.1: aspartate transaminase; EC 2.6.1.1 from Geobacillus stearothermophilus

30% id,
95% cov

More...

Shew_1332: short-chain dehydrogenase/reductase SDR (RefSeq)
is similar to:
PaperBLAST

ptmA / Q0P8S6: L-glutamine-D-fructose-6-phosphate transaminase subunit (EC 2.6.1.16) from Campylobacter jejuni

26% id,
99% cov

Shew_2862: short chain dehydrogenase (RefSeq)
is similar to:
PaperBLAST

ptmA / Q0P8S6: L-glutamine-D-fructose-6-phosphate transaminase subunit (EC 2.6.1.16) from Campylobacter jejuni

23% id,
100% cov

Shew_2839: carbamoyl phosphate synthase small subunit (RefSeq)
is similar to:
PaperBLAST

pabA / P28819: 4-amino-4-deoxychorismate synthase; anthranilate synthase (subunit II) (EC 2.6.1.123) from Bacillus subtilis

28% id,
76% cov

Shew_2302: amidophosphoribosyltransferase (RefSeq)
is similar to:
PaperBLAST

Q6GES3: glutamine-fructose-6-phosphate transaminase (isomerizing) (EC 2.6.1.16) from Staphylococcus aureus

25% id,
54% cov

GLMS_BACSU / P0CI73: Glutamine--fructose-6-phosphate aminotransferase [isomerizing]; D-fructose-6-phosphate amidotransferase; GFAT; Glucosamine-6-phosphate synthase; Hexosephosphate aminotransferase; L-glutamine--D-fructose-6-phosphate amidotransferase; EC 2.6.1.16 from Bacillus subtilis
P0CI73: glutamine-fructose-6-phosphate transaminase (isomerizing) (EC 2.6.1.16) from Bacillus subtilis

25% id,
52% cov

GFPT1_HUMAN / Q06210: Glutamine--fructose-6-phosphate aminotransferase [isomerizing] 1; D-fructose-6-phosphate amidotransferase 1; Glutamine:fructose-6-phosphate amidotransferase 1; GFAT 1; GFAT1; Hexosephosphate aminotransferase 1; EC 2.6.1.16 from Homo sapiens
GFPT1 / Q06210: glutamine:fructose-6-phosphate amidotransferase I (EC 2.6.1.16) from Homo sapiens

24% id,
46% cov

More...

Shew_3677: isochorismate synthase (RefSeq)
is similar to:
PaperBLAST

pabB / P28820: 4-amino-4-deoxychorismate synthase (para-aminobenzoate synthase) (EC 2.6.1.123) from Bacillus subtilis
P28820: 4-amino-4-deoxychorismate synthase (2-amino-4-deoxychorismate-forming) (EC 2.6.1.123); aminodeoxychorismate synthase (EC 2.6.1.85) from Bacillus subtilis

27% id,
47% cov

Shew_3306: KpsF/GutQ family protein (RefSeq)
is similar to:
PaperBLAST

GLMS_SULTO / F9VPA4: Glutamine--fructose-6-phosphate aminotransferase [isomerizing]; D-fructose-6-phosphate amidotransferase; GFAT; Glucosamine-6-phosphate synthase; Glutamine:fructose-6-phosphate amidotransferase; Hexosephosphate aminotransferase; L-glutamine--D-fructose-6-phosphate amidotransferase; EC 2.6.1.16 from Sulfurisphaera tokodaii
glmS / F9VPA4: glutamine—fructose-6-phosphate transaminase (EC 2.6.1.16) from Sulfurisphaera tokodaii

25% id,
50% cov

Shew_3038: asparagine synthase (glutamine-hydrolyzing) (RefSeq)
is similar to:
PaperBLAST

GLMS_METMP / Q6LWM9: Glutamine--fructose-6-phosphate aminotransferase [isomerizing]; D-fructose-6-phosphate amidotransferase; GFAT; Glucosamine-6-phosphate synthase; Hexosephosphate aminotransferase; L-glutamine--D-fructose-6-phosphate amidotransferase; EC 2.6.1.16 from Methanococcus maripaludis

26% id,
25% cov

GLMS_SULTO / F9VPA4: Glutamine--fructose-6-phosphate aminotransferase [isomerizing]; D-fructose-6-phosphate amidotransferase; GFAT; Glucosamine-6-phosphate synthase; Glutamine:fructose-6-phosphate amidotransferase; Hexosephosphate aminotransferase; L-glutamine--D-fructose-6-phosphate amidotransferase; EC 2.6.1.16 from Sulfurisphaera tokodaii
glmS / F9VPA4: glutamine—fructose-6-phosphate transaminase (EC 2.6.1.16) from Sulfurisphaera tokodaii

28% id,
23% cov

Q9HT25: glutamine-fructose-6-phosphate transaminase (isomerizing) (EC 2.6.1.16) from Pseudomonas aeruginosa

32% id,
14% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 22 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory