Searching in Shewanella loihica PV-4 (PV4)
Found 4 curated entries in PaperBLAST's database that match '2.6.1.118' as complete word(s).
These curated entries have 2 distinct sequences.
Running ublast with E ≤ 0.01
Found 5 relevant proteins in Shewanella loihica PV-4, or try another query
| Shew_0578: bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein (RefSeq) is similar to: | PaperBLAST |
lysJ / Q4JAP8: [amino group carrier protein]-C-terminal-L-glutamyl-γ-L-lysine aminotransferase (EC 2.6.1.118; EC 2.6.1.124) from Sulfolobus acidocaldarius | 37% id, 99% cov |
LYSJ_THET2 / Q93R93: [LysW]-aminoadipate semialdehyde transaminase; EC 2.6.1.118 from Thermus thermophilus | 38% id, 94% cov |
| Shew_3172: 4-aminobutyrate aminotransferase (RefSeq) is similar to: | PaperBLAST |
LYSJ_THET2 / Q93R93: [LysW]-aminoadipate semialdehyde transaminase; EC 2.6.1.118 from Thermus thermophilus | 36% id, 94% cov |
lysJ / Q4JAP8: [amino group carrier protein]-C-terminal-L-glutamyl-γ-L-lysine aminotransferase (EC 2.6.1.118; EC 2.6.1.124) from Sulfolobus acidocaldarius | 34% id, 93% cov |
| Shew_0966: beta alanine--pyruvate transaminase (RefSeq) is similar to: | PaperBLAST |
LYSJ_THET2 / Q93R93: [LysW]-aminoadipate semialdehyde transaminase; EC 2.6.1.118 from Thermus thermophilus | 28% id, 99% cov |
lysJ / Q4JAP8: [amino group carrier protein]-C-terminal-L-glutamyl-γ-L-lysine aminotransferase (EC 2.6.1.118; EC 2.6.1.124) from Sulfolobus acidocaldarius | 31% id, 55% cov |
| Shew_1718: adenosylmethionine-8-amino-7-oxononanoate aminotransferase (RefSeq) is similar to: | PaperBLAST |
LYSJ_THET2 / Q93R93: [LysW]-aminoadipate semialdehyde transaminase; EC 2.6.1.118 from Thermus thermophilus | 29% id, 92% cov |
lysJ / Q4JAP8: [amino group carrier protein]-C-terminal-L-glutamyl-γ-L-lysine aminotransferase (EC 2.6.1.118; EC 2.6.1.124) from Sulfolobus acidocaldarius | 28% id, 97% cov |
| Shew_1012: glutamate-1-semialdehyde-2,1-aminomutase (RefSeq) is similar to: | PaperBLAST |
LYSJ_THET2 / Q93R93: [LysW]-aminoadipate semialdehyde transaminase; EC 2.6.1.118 from Thermus thermophilus | 33% id, 75% cov |
lysJ / Q4JAP8: [amino group carrier protein]-C-terminal-L-glutamyl-γ-L-lysine aminotransferase (EC 2.6.1.118; EC 2.6.1.124) from Sulfolobus acidocaldarius | 31% id, 74% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 5 reading frames. These were all redundant with annotated proteins.
Lawrence Berkeley National Laboratory