Searching in Shewanella loihica PV-4 (PV4)
Found 5 curated entries in PaperBLAST's database that match '2.6.1.36' as complete word(s).
These curated entries have 5 distinct sequences.
Running ublast with E ≤ 0.01
Found 5 relevant proteins in Shewanella loihica PV-4, or try another query
| Shew_3172: 4-aminobutyrate aminotransferase (RefSeq) is similar to: | PaperBLAST |
ORNAT_THEKO / Q5JEW1: Ornithine aminotransferase; Orn-AT; Lysine aminotransferase; Lys-AT; EC 2.6.1.13; EC 2.6.1.36 from Thermococcus kodakarensis | 37% id, 88% cov |
CA265_RS14455: L-lysine 6-transaminase (EC 2.6.1.36) from Pedobacter sp. | 29% id, 91% cov |
P9WQ77: L-lysine 6-transaminase (EC 2.6.1.36) from Mycobacterium tuberculosis | 29% id, 88% cov |
| Shew_0966: beta alanine--pyruvate transaminase (RefSeq) is similar to: | PaperBLAST |
ORNAT_THEKO / Q5JEW1: Ornithine aminotransferase; Orn-AT; Lysine aminotransferase; Lys-AT; EC 2.6.1.13; EC 2.6.1.36 from Thermococcus kodakarensis | 29% id, 91% cov |
CA265_RS14455: L-lysine 6-transaminase (EC 2.6.1.36) from Pedobacter sp. | 23% id, 49% cov |
| Shew_1718: adenosylmethionine-8-amino-7-oxononanoate aminotransferase (RefSeq) is similar to: | PaperBLAST |
ORNAT_THEKO / Q5JEW1: Ornithine aminotransferase; Orn-AT; Lysine aminotransferase; Lys-AT; EC 2.6.1.13; EC 2.6.1.36 from Thermococcus kodakarensis | 29% id, 84% cov |
| Shew_0578: bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein (RefSeq) is similar to: | PaperBLAST |
A4F7V1: L-lysine 6-transaminase (EC 2.6.1.36) from Saccharopolyspora erythraea | 25% id, 91% cov |
lat / Q01767: lysine ε-aminotransferase (EC 2.6.1.36) from Streptomyces clavuligerus | 29% id, 73% cov |
ORNAT_THEKO / Q5JEW1: Ornithine aminotransferase; Orn-AT; Lysine aminotransferase; Lys-AT; EC 2.6.1.13; EC 2.6.1.36 from Thermococcus kodakarensis | 33% id, 55% cov |
| Shew_1012: glutamate-1-semialdehyde-2,1-aminomutase (RefSeq) is similar to: | PaperBLAST |
ORNAT_THEKO / Q5JEW1: Ornithine aminotransferase; Orn-AT; Lysine aminotransferase; Lys-AT; EC 2.6.1.13; EC 2.6.1.36 from Thermococcus kodakarensis | 30% id, 73% cov |
P9WQ77: L-lysine 6-transaminase (EC 2.6.1.36) from Mycobacterium tuberculosis | 25% id, 76% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 5 reading frames. These were all redundant with annotated proteins.
Lawrence Berkeley National Laboratory