Searching in Shewanella loihica PV-4 (PV4)
Found 28 curated entries in PaperBLAST's database that match '2.7.1.15' as complete word(s).
These curated entries have 23 distinct sequences.
Running ublast with E ≤ 0.01
Found 6 relevant proteins in Shewanella loihica PV-4, or try another query
Shew_0696: ribokinase (RefSeq) is similar to: | PaperBLAST |
A0A0H2UL04: ribokinase (EC 2.7.1.15) from Vibrio cholerae | 52% id, 96% cov |
RBSK_ECOLI / P0A9J6: Ribokinase; RK; EC 2.7.1.15 from Escherichia coli | 49% id, 95% cov |
BWI76_RS00290: Ribokinase (EC 2.7.1.15) from Klebsiella michiganensis | 47% id, 97% cov |
Shew_2725: ribokinase-like domain-containing protein (RefSeq) is similar to: | PaperBLAST |
AO356_00950: Ribokinase (EC 2.7.1.15) from Pseudomonas fluorescens | 29% id, 92% cov |
AO353_20835: Ribokinase (EC 2.7.1.15) from Pseudomonas fluorescens | 27% id, 99% cov |
BT2804: ribokinase (EC 2.7.1.15) from Bacteroides thetaiotaomicron | 26% id, 97% cov |
Shew_0659: bifunctional heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase (RefSeq) is similar to: | PaperBLAST |
RBSK_HUMAN / Q9H477: Ribokinase; RK; EC 2.7.1.15 from Homo sapiens | 31% id, 45% cov |
Shew_0825: ribose-5-phosphate isomerase A (RefSeq) is similar to: | PaperBLAST |
RBSKI_FRUSL / P83534: Bifunctional ribokinase/ribose-5-phosphate isomerase A; EC 2.7.1.15; EC 5.3.1.6 from Fructilactobacillus sanfranciscensis | 34% id, 42% cov |
Shew_0078: ribokinase-like domain-containing protein (RefSeq) is similar to: | PaperBLAST |
RBSK_YEAST / P25332: Ribokinase; RK; EC 2.7.1.15 from Saccharomyces cerevisiae | 25% id, 43% cov |
BT2803: ribokinase (EC 2.7.1.15) from Bacteroides thetaiotaomicron | 24% id, 36% cov |
Q8NQR0: ribokinase (EC 2.7.1.15) from Corynebacterium glutamicum | 35% id, 24% cov |
Shew_2095: phosphomethylpyrimidine kinase (RefSeq) is similar to: | PaperBLAST |
RBSKI_FRUSL / P83534: Bifunctional ribokinase/ribose-5-phosphate isomerase A; EC 2.7.1.15; EC 5.3.1.6 from Fructilactobacillus sanfranciscensis | 28% id, 16% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 6 reading frames. These were all redundant with annotated proteins.
Lawrence Berkeley National Laboratory