Searching in Shewanella loihica PV-4 (PV4)
Found 19 curated entries in PaperBLAST's database that match '2.7.1.39' as complete word(s).
These curated entries have 13 distinct sequences.
Running ublast with E ≤ 0.01
Found 3 relevant proteins in Shewanella loihica PV-4, or try another query
Shew_1080: homoserine kinase (RefSeq) is similar to: | PaperBLAST |
KHSE_ECOLI / P00547: Homoserine kinase; HK; HSK; EC 2.7.1.39 from Escherichia coli | 56% id, 99% cov |
Echvi_2001: homoserine kinase (EC 2.7.1.39) from Echinicola vietnamensis | 35% id, 93% cov |
N515DRAFT_0576: homoserine kinase (EC 2.7.1.39) from Dyella japonica | 36% id, 87% cov |
Shew_0213: shikimate kinase I (RefSeq) is similar to: | PaperBLAST |
thrB / B8DPL9: homoserine kinase (EC 2.7.1.39) from Desulfovibrio vulgaris | 30% id, 86% cov |
Shew_2915: 4-diphosphocytidyl-2C-methyl-D-erythritol kinase (RefSeq) is similar to: | PaperBLAST |
CA265_RS23470: homoserine kinase (EC 2.7.1.39) from Pedobacter sp. | 29% id, 54% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 3 reading frames. These were all redundant with annotated proteins.
Lawrence Berkeley National Laboratory