Curated BLAST for Genomes


Curated BLAST

Searching in Shewanella loihica PV-4 (PV4)

Found 18 curated entries in PaperBLAST's database that match '' as complete word(s).

These curated entries have 13 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Shewanella loihica PV-4, or try another query

Shew_2288: galactose-1-phosphate uridylyltransferase (RefSeq)
is similar to:

GAL7_ECOLI / P09148: Galactose-1-phosphate uridylyltransferase; Gal-1-P uridylyltransferase; UDP-glucose--hexose-1-phosphate uridylyltransferase; EC from Escherichia coli
GalB / b0758: galactose-1-phosphate uridylyltransferase (EC from Escherichia coli
galT / P09148: galactose-1-phosphate uridylyltransferase (EC from Escherichia coli
P09148: UDP-glucose-hexose-1-phosphate uridylyltransferase (EC from Escherichia coli

59% id,
99% cov

Echvi_0695: UDP-glucose--hexose-1-phosphate uridylyltransferase (EC from Echinicola vietnamensis

51% id,
99% cov

A2AMS3: UDP-glucose-hexose-1-phosphate uridylyltransferase (EC from Mus musculus

53% id,
96% cov


The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory