Curated BLAST

Curated BLAST for Genomes

Curated BLAST

Searching in Shewanella loihica PV-4 (PV4)

Found 29 curated entries in PaperBLAST's database that match '3.1.3.15' as complete word(s).

These curated entries have 23 distinct sequences.

Running ublast with E ≤ 0.01

Found 8 relevant proteins in Shewanella loihica PV-4, or try another query

Shew_2200: imidazole glycerol-phosphate dehydratase/histidinol phosphatase (RefSeq) is similar to:	PaperBLAST
HisB / b2022: imidazoleglycerol-phosphate dehydratase / histidinol-phosphatase (EC 4.2.1.19; EC 3.1.3.15) from Escherichia coli hisB / P06987: imidazoleglycerol-phosphate dehydratase / histidinol-phosphatase (EC 4.2.1.19; EC 3.1.3.15) from Escherichia coli	66% id, 100% cov
HIS7_ECO57 / Q9S5G5: Histidine biosynthesis bifunctional protein HisB; EC 3.1.3.15; EC 4.2.1.19 from Escherichia coli	65% id, 100% cov
HIS7_SPILD / D2QPE6: Histidine biosynthesis bifunctional protein HisB; EC 3.1.3.15; EC 4.2.1.19 from Spirosoma linguale	47% id, 100% cov
HIS7_BACTN / Q8ABA7: Histidine biosynthesis bifunctional protein HisB; EC 3.1.3.15; EC 4.2.1.19 from Bacteroides thetaiotaomicron	47% id, 100% cov
More...

Shew_2321: inositol monophosphatase (RefSeq) is similar to:	PaperBLAST
AZOBR_RS03845: Histidinol-phosphatase [alternative form] (EC 3.1.3.15) from Azospirillum brasilense	33% id, 93% cov
Ga0059261_2035: Histidinol-phosphatase [alternative form] (EC 3.1.3.15) from Sphingomonas koreensis	31% id, 95% cov
PGA1_c21860: Histidinol-phosphatase [alternative form] (EC 3.1.3.15) from Phaeobacter inhibens	33% id, 88% cov
HISN_MYCTU / P95189: Histidinol-phosphatase; HolPase; Histidinol-phosphate phosphatase; EC 3.1.3.15 from Mycobacterium tuberculosis	30% id, 93% cov
HISN_STRCO / Q9K4B1: Histidinol-phosphatase; HolPase; Histidinol-phosphate phosphatase; EC 3.1.3.15 from Streptomyces coelicolor	31% id, 90% cov
HISN_CORGL / Q8NS80: Histidinol-phosphatase; HolPase; Histidinol-phosphate phosphatase; EC 3.1.3.15 from Corynebacterium glutamicum hisN / Q8NS80: histidinol-phosphatase (EC 3.1.3.15) from Corynebacterium glutamicum Q8NS80: histidinol-phosphatase (EC 3.1.3.15) from Corynebacterium glutamicum	30% id, 92% cov
HIS7_ARATH / Q6NPM8: Bifunctional phosphatase IMPL2, chloroplastic; Histidinol-phosphatase; Histidinol-phosphate phosphatase; HPP; Inositol-phosphate phosphatase; L-galactose 1-phosphate phosphatase; Protein HISTIDINE BIOSYNTHESIS 7; Protein MYO-INOSITOL MONOPHOSPHATASE-LIKE 2; EC 3.1.3.15; EC 3.1.3.25; EC 3.1.3.93 from Arabidopsis thaliana HISN7 / Q6NPM8: histidinol phosphate phosphatase (EC 3.1.3.15; EC 3.1.3.93; EC 3.1.3.25) from Arabidopsis thaliana Q6NPM8: histidinol-phosphatase (EC 3.1.3.15); inositol-phosphate phosphatase (EC 3.1.3.25) from Arabidopsis thaliana	31% id, 68% cov
More...

Shew_0130: 3'(2'),5'-bisphosphate nucleotidase (RefSeq) is similar to:	PaperBLAST
Ga0059261_2035: Histidinol-phosphatase [alternative form] (EC 3.1.3.15) from Sphingomonas koreensis	32% id, 86% cov
HISN_MYCTU / P95189: Histidinol-phosphatase; HolPase; Histidinol-phosphate phosphatase; EC 3.1.3.15 from Mycobacterium tuberculosis	30% id, 86% cov
PGA1_c21860: Histidinol-phosphatase [alternative form] (EC 3.1.3.15) from Phaeobacter inhibens	29% id, 89% cov
HISN_CORGL / Q8NS80: Histidinol-phosphatase; HolPase; Histidinol-phosphate phosphatase; EC 3.1.3.15 from Corynebacterium glutamicum hisN / Q8NS80: histidinol-phosphatase (EC 3.1.3.15) from Corynebacterium glutamicum Q8NS80: histidinol-phosphatase (EC 3.1.3.15) from Corynebacterium glutamicum	28% id, 89% cov
AZOBR_RS03845: Histidinol-phosphatase [alternative form] (EC 3.1.3.15) from Azospirillum brasilense	26% id, 88% cov
HIS7_ARATH / Q6NPM8: Bifunctional phosphatase IMPL2, chloroplastic; Histidinol-phosphatase; Histidinol-phosphate phosphatase; HPP; Inositol-phosphate phosphatase; L-galactose 1-phosphate phosphatase; Protein HISTIDINE BIOSYNTHESIS 7; Protein MYO-INOSITOL MONOPHOSPHATASE-LIKE 2; EC 3.1.3.15; EC 3.1.3.25; EC 3.1.3.93 from Arabidopsis thaliana HISN7 / Q6NPM8: histidinol phosphate phosphatase (EC 3.1.3.15; EC 3.1.3.93; EC 3.1.3.25) from Arabidopsis thaliana Q6NPM8: histidinol-phosphatase (EC 3.1.3.15); inositol-phosphate phosphatase (EC 3.1.3.25) from Arabidopsis thaliana	27% id, 69% cov
HISN_STRCO / Q9K4B1: Histidinol-phosphatase; HolPase; Histidinol-phosphate phosphatase; EC 3.1.3.15 from Streptomyces coelicolor	35% id, 46% cov
More...

Shew_1427: 3'(2'),5'-bisphosphate nucleotidase (RefSeq) is similar to:	PaperBLAST
HISN_MYCTU / P95189: Histidinol-phosphatase; HolPase; Histidinol-phosphate phosphatase; EC 3.1.3.15 from Mycobacterium tuberculosis	30% id, 90% cov
PGA1_c21860: Histidinol-phosphatase [alternative form] (EC 3.1.3.15) from Phaeobacter inhibens	29% id, 89% cov
AZOBR_RS03845: Histidinol-phosphatase [alternative form] (EC 3.1.3.15) from Azospirillum brasilense	27% id, 92% cov
HISN_CORGL / Q8NS80: Histidinol-phosphatase; HolPase; Histidinol-phosphate phosphatase; EC 3.1.3.15 from Corynebacterium glutamicum hisN / Q8NS80: histidinol-phosphatase (EC 3.1.3.15) from Corynebacterium glutamicum Q8NS80: histidinol-phosphatase (EC 3.1.3.15) from Corynebacterium glutamicum	27% id, 87% cov
Ga0059261_2035: Histidinol-phosphatase [alternative form] (EC 3.1.3.15) from Sphingomonas koreensis	24% id, 91% cov
HIS7_ARATH / Q6NPM8: Bifunctional phosphatase IMPL2, chloroplastic; Histidinol-phosphatase; Histidinol-phosphate phosphatase; HPP; Inositol-phosphate phosphatase; L-galactose 1-phosphate phosphatase; Protein HISTIDINE BIOSYNTHESIS 7; Protein MYO-INOSITOL MONOPHOSPHATASE-LIKE 2; EC 3.1.3.15; EC 3.1.3.25; EC 3.1.3.93 from Arabidopsis thaliana HISN7 / Q6NPM8: histidinol phosphate phosphatase (EC 3.1.3.15; EC 3.1.3.93; EC 3.1.3.25) from Arabidopsis thaliana Q6NPM8: histidinol-phosphatase (EC 3.1.3.15); inositol-phosphate phosphatase (EC 3.1.3.25) from Arabidopsis thaliana	25% id, 65% cov
More...

Shew_1157: alkaline phosphatase (RefSeq)
is similar to:

PaperBLAST

PsiA / b0383: alkaline phosphatase (EC 3.1.3.1; EC 3.1.3.75; EC 3.1.3.41; EC 3.1.3.74; EC 3.1.3.99; EC 3.1.3.5; EC 3.1.3.6; EC 3.1.3.89; EC 3.1.3.91; EC 3.1.3.60; EC 3.1.3.15; EC 3.1.3.102; EC 3.1.3.108; EC 3.1.3.11; EC 3.1.3.20; EC 3.1.3.19; EC 3.1.3.3; EC 3.6.1.25; EC 3.6.1.1; EC 3.1.3.23; EC 3.1.3.38; EC 3.1.3.18; EC 3.1.3.68; EC 3.9.1.1) from Escherichia coli
phoA / P00634: alkaline phosphatase (EC 3.1.3.1; EC 3.1.3.75; EC 3.1.3.41; EC 3.1.3.74; EC 3.1.3.99; EC 3.1.3.5; EC 3.1.3.6; EC 3.1.3.89; EC 3.1.3.91; EC 3.1.3.60; EC 3.1.3.15; EC 3.1.3.102; EC 3.1.3.108; EC 3.1.3.11; EC 3.1.3.20; EC 3.1.3.19; EC 3.1.3.3; EC 3.6.1.25; EC 3.6.1.1; EC 3.1.3.23; EC 3.1.3.38; EC 3.1.3.18; EC 3.1.3.68; EC 3.9.1.1) from Escherichia coli

33% id,
80% cov

Shew_3226: alkaline phosphatase (RefSeq)
is similar to:

PaperBLAST

34% id,
74% cov

Shew_1158: alkaline phosphatase (RefSeq)
is similar to:

PaperBLAST

25% id,
64% cov

Shew_2357: D,D-heptose 1,7-bisphosphate phosphatase (RefSeq) is similar to:	PaperBLAST
HisB / b2022: imidazoleglycerol-phosphate dehydratase / histidinol-phosphatase (EC 4.2.1.19; EC 3.1.3.15) from Escherichia coli hisB / P06987: imidazoleglycerol-phosphate dehydratase / histidinol-phosphatase (EC 4.2.1.19; EC 3.1.3.15) from Escherichia coli	30% id, 40% cov
HIS7_ECO57 / Q9S5G5: Histidine biosynthesis bifunctional protein HisB; EC 3.1.3.15; EC 4.2.1.19 from Escherichia coli	30% id, 40% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 8 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory