Curated BLAST for Genomes

 

Curated BLAST

Searching in Shewanella loihica PV-4 (PV4)

Found 331 curated entries in PaperBLAST's database that match '3.2.1.23' as complete word(s).

These curated entries have 255 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Shewanella loihica PV-4, or try another query

Shew_3269: Beta-galactosidase (RefSeq)
is similar to:
PaperBLAST

AAX48919.1: β-galactosidase (Gal4214-1) (EC 3.2.1.23)

40% id,
92% cov

AAD36268.1: β-galactosidase Z (LacZ;TmLac;TM1193) (EC 3.2.1.23)

40% id,
91% cov

AAC24219.1: β-galactosidase (BgalB) (EC 3.2.1.23)

40% id,
91% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory