Searching in Shewanella loihica PV-4 (PV4)
Found 6 curated entries in PaperBLAST's database that match '3.5.1.30' as complete word(s).
These curated entries have 6 distinct sequences.
Running ublast with E ≤ 0.01
Found 2 relevant proteins in Shewanella loihica PV-4, or try another query
| Shew_0409: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase (RefSeq) is similar to: | PaperBLAST |
B3IVI7: 5-aminopentanamidase (EC 3.5.1.30) from Pseudomonas putida | 31% id, 98% cov |
PfGW456L13_1170: 5-aminopentanamidase (EC 3.5.1.30) from Pseudomonas fluorescens | 32% id, 83% cov |
Pf6N2E2_4777: 5-aminopentanamidase (EC 3.5.1.30) from Pseudomonas fluorescens | 29% id, 92% cov |
| Shew_2927: apolipoprotein N-acyltransferase (RefSeq) is similar to: | PaperBLAST |
Pf6N2E2_4777: 5-aminopentanamidase (EC 3.5.1.30) from Pseudomonas fluorescens | 22% id, 78% cov |
AO353_07425: 5-aminopentanamidase (EC 3.5.1.30) from Pseudomonas fluorescens | 24% id, 58% cov |
Pf1N1B4_2504: 5-aminopentanamidase (EC 3.5.1.30) from Pseudomonas fluorescens | 24% id, 51% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 2 reading frames. These were all redundant with annotated proteins.
Lawrence Berkeley National Laboratory