Searching in Shewanella loihica PV-4 (PV4)
Found 65 curated entries in PaperBLAST's database that match '3.5.3.1' as complete word(s).
These curated entries have 50 distinct sequences.
Running ublast with E ≤ 0.01
Found 2 relevant proteins in Shewanella loihica PV-4, or try another query
| Shew_1621: agmatinase (RefSeq) is similar to: | PaperBLAST |
GDAH_HUMAN / Q9BSE5: Guanidino acid hydrolase, mitochondrial; Arginase, mitochondrial; Guanidinobutyrase, mitochondrial; Guanidinopropionase, mitochondrial; EC 3.5.3.-; EC 3.5.3.1; EC 3.5.3.7; EC 3.5.3.17 from Homo sapiens | 39% id, 82% cov |
GDAH_MOUSE / A2AS89: Guanidino acid hydrolase, mitochondrial; Arginase, mitochondrial; Guanidinobutyrase, mitochondrial; Guanidinopropionase, mitochondrial; EC 3.5.3.-; EC 3.5.3.1; EC 3.5.3.7; EC 3.5.3.17 from Mus musculus | 37% id, 81% cov |
ARG2 / Q5UNS1: arginase (EC 3.5.3.1) from Solanum lycopersicum | 32% id, 81% cov |
| Shew_3372: arginase/agmatinase/formiminoglutamase (RefSeq) is similar to: | PaperBLAST |
ARGI2_ARATH / Q9ZPF5: Arginase 2, chloroplastic/mitochondrial; Agmatinase ARGAH2; Arginine amidohydrolase 2; EC 3.5.3.1; EC 3.5.3.11 from Arabidopsis thaliana | 23% id, 77% cov |
ARGI1_ORYSI / B8AU84: Arginase 1, mitochondrial; Arginine amidohydrolase 1; EC 3.5.3.1 from Oryza sativa | 23% id, 73% cov |
ARGI1_ARATH / P46637: Arginase 1, mitochondrial; Agmatinase ARGAH1; Arginine amidohydrolase 1; AtARGAH1; EC 3.5.3.1; EC 3.5.3.11 from Arabidopsis thaliana | 23% id, 66% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 3 reading frames. Except for 2 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.
| 4021280-4022377 (frame +2) on 113993 is similar to: | PaperBLAST |
ARGI2_ARATH / Q9ZPF5: Arginase 2, chloroplastic/mitochondrial; Agmatinase ARGAH2; Arginine amidohydrolase 2; EC 3.5.3.1; EC 3.5.3.11 from Arabidopsis thaliana | 23% id, 79% cov |
| 438696-440384 (frame +3) on 113993 is similar to: | PaperBLAST |
ARGI_PLAF7 / Q8I384: Arginase; PFA; PfArg; EC 3.5.3.1 from Plasmodium falciparum | 33% id, 15% cov |
Lawrence Berkeley National Laboratory