Curated BLAST for Genomes

 

Curated BLAST

Searching in Shewanella loihica PV-4 (PV4)

Found 17 curated entries in PaperBLAST's database that match '3.7.1.3' as complete word(s).

These curated entries have 13 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Shewanella loihica PV-4, or try another query

Shew_3556: aminotransferase, class V (RefSeq)
is similar to:
PaperBLAST

PS417_23650: Kynureninase (EC 3.7.1.3) from Pseudomonas simiae

27% id,
84% cov

RR42_RS15385: Kynureninase (EC 3.7.1.3) from Cupriavidus basilensis

27% id,
84% cov

AO353_05935: Kynureninase (EC 3.7.1.3) from Pseudomonas fluorescens

26% id,
84% cov

More...

Shew_2317: cysteine desulfurase IscS (RefSeq)
is similar to:
PaperBLAST

RR42_RS15385: Kynureninase (EC 3.7.1.3) from Cupriavidus basilensis

25% id,
80% cov

AO353_05935: Kynureninase (EC 3.7.1.3) from Pseudomonas fluorescens

24% id,
79% cov

KYNU_PSEFL / P83788: Kynureninase; L-kynurenine hydrolase; EC 3.7.1.3 from Pseudomonas fluorescens
kyn / P83788: kynureninase subunit (EC 3.7.1.3) from Pseudomonas fluorescens

24% id,
74% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory