Curated BLAST
Searching in Shewanella loihica PV-4 (PV4)
Found 15 curated entries in PaperBLAST's database that match '4.2.1.18'.
These curated entries have 12 distinct sequences.
Running ublast with E ≤ 0.01
Found 11 relevant proteins in Shewanella loihica PV-4, or try another query
Shew_2572: enoyl-CoA hydratase/isomerase (RefSeq)
is similar to: | PaperBLAST |
Pf6N2E2_2193: Methylglutaconyl-CoA hydratase (EC 4.2.1.18) from Pseudomonas fluorescens | 51% id,
92% cov |
AO356_01590: Methylglutaconyl-CoA hydratase (EC 4.2.1.18) from Pseudomonas fluorescens | 51% id,
91% cov |
liuC / Q88FM3: 3-methylglutaconyl-CoA hydratase (EC 4.2.1.18) from Pseudomonas putida | 50% id,
92% cov |
SM_b21126: 3-methylglutaconyl-CoA hydratase (EC 4.2.1.18) from Sinorhizobium meliloti | 39% id,
99% cov |
CA265_RS09125: Methylglutaconyl-CoA hydratase (EC 4.2.1.18) from Pedobacter sp. | 30% id,
97% cov |
BBSH_THAAR / Q9KJE7: (E)-benzylidenesuccinyl-CoA hydratase; EC 4.2.1.180 from Thauera aromatica
bbsH / Q9KJE7: (2S)-2-[(R)-hydroxybenzyl]succinyl-CoA monomer (EC 4.2.1.180) from Thauera aromatica | 25% id,
99% cov |
Q1D5Y4: methylglutaconyl-CoA hydratase (EC 4.2.1.18) from Myxococcus xanthus | 26% id,
92% cov |
F4JML5: methylglutaconyl-CoA hydratase (EC 4.2.1.18) from Arabidopsis thaliana | 26% id,
88% cov |
hlyA: 3-hydroxy-3-methylglutaryl-coenzyme A lyase/3-methylglutaconyl-coenzyme A hydratase; EC 4.1.3.4; EC 4.2.1.18 from Emericella nidulans | 31% id,
41% cov |
More... |
Shew_1670: enoyl-CoA hydratase (RefSeq)
is similar to: | PaperBLAST |
Q1D5Y4: methylglutaconyl-CoA hydratase (EC 4.2.1.18) from Myxococcus xanthus | 39% id,
96% cov |
BBSH_THAAR / Q9KJE7: (E)-benzylidenesuccinyl-CoA hydratase; EC 4.2.1.180 from Thauera aromatica
bbsH / Q9KJE7: (2S)-2-[(R)-hydroxybenzyl]succinyl-CoA monomer (EC 4.2.1.180) from Thauera aromatica | 38% id,
96% cov |
CA265_RS09125: Methylglutaconyl-CoA hydratase (EC 4.2.1.18) from Pedobacter sp. | 27% id,
98% cov |
Fer4 / Q4PEN0: methylglutaconyl-CoA hydratase (EC 4.2.1.18) from Ustilago maydis | 31% id,
81% cov |
AUHM_MOUSE / Q9JLZ3: Methylglutaconyl-CoA hydratase, mitochondrial; 3-MG-CoA hydratase; AU-specific RNA-binding enoyl-CoA hydratase; AU-binding enoyl-CoA hydratase; muAUH; Itaconyl-CoA hydratase; EC 4.2.1.18; EC 4.2.1.56 from Mus musculus | 32% id,
76% cov |
F4JML5: methylglutaconyl-CoA hydratase (EC 4.2.1.18) from Arabidopsis thaliana | 36% id,
64% cov |
AUHM_HUMAN / Q13825: Methylglutaconyl-CoA hydratase, mitochondrial; 3-MG-CoA hydratase; AU-specific RNA-binding enoyl-CoA hydratase; AU-binding protein/enoyl-CoA hydratase; Itaconyl-CoA hydratase; EC 4.2.1.18; EC 4.2.1.56 from Homo sapiens
AUH / Q13825: methylglutaconyl-CoA hydratase subunit (EC 4.2.1.18) from Homo sapiens
Q13825: methylglutaconyl-CoA hydratase (EC 4.2.1.18) from Homo sapiens | 31% id,
71% cov |
More... |
Shew_2672: carnitinyl-CoA dehydratase (RefSeq)
is similar to: | PaperBLAST |
BBSH_THAAR / Q9KJE7: (E)-benzylidenesuccinyl-CoA hydratase; EC 4.2.1.180 from Thauera aromatica
bbsH / Q9KJE7: (2S)-2-[(R)-hydroxybenzyl]succinyl-CoA monomer (EC 4.2.1.180) from Thauera aromatica | 36% id,
100% cov |
Q1D5Y4: methylglutaconyl-CoA hydratase (EC 4.2.1.18) from Myxococcus xanthus | 38% id,
92% cov |
Fer4 / Q4PEN0: methylglutaconyl-CoA hydratase (EC 4.2.1.18) from Ustilago maydis | 34% id,
93% cov |
F4JML5: methylglutaconyl-CoA hydratase (EC 4.2.1.18) from Arabidopsis thaliana | 36% id,
83% cov |
SM_b21126: 3-methylglutaconyl-CoA hydratase (EC 4.2.1.18) from Sinorhizobium meliloti | 29% id,
95% cov |
Pf6N2E2_2193: Methylglutaconyl-CoA hydratase (EC 4.2.1.18) from Pseudomonas fluorescens | 28% id,
94% cov |
AO356_01590: Methylglutaconyl-CoA hydratase (EC 4.2.1.18) from Pseudomonas fluorescens | 28% id,
94% cov |
liuC / Q88FM3: 3-methylglutaconyl-CoA hydratase (EC 4.2.1.18) from Pseudomonas putida | 28% id,
95% cov |
CA265_RS09125: Methylglutaconyl-CoA hydratase (EC 4.2.1.18) from Pedobacter sp. | 27% id,
95% cov |
AUHM_MOUSE / Q9JLZ3: Methylglutaconyl-CoA hydratase, mitochondrial; 3-MG-CoA hydratase; AU-specific RNA-binding enoyl-CoA hydratase; AU-binding enoyl-CoA hydratase; muAUH; Itaconyl-CoA hydratase; EC 4.2.1.18; EC 4.2.1.56 from Mus musculus | 32% id,
81% cov |
AUHM_HUMAN / Q13825: Methylglutaconyl-CoA hydratase, mitochondrial; 3-MG-CoA hydratase; AU-specific RNA-binding enoyl-CoA hydratase; AU-binding protein/enoyl-CoA hydratase; Itaconyl-CoA hydratase; EC 4.2.1.18; EC 4.2.1.56 from Homo sapiens
AUH / Q13825: methylglutaconyl-CoA hydratase subunit (EC 4.2.1.18) from Homo sapiens
Q13825: methylglutaconyl-CoA hydratase (EC 4.2.1.18) from Homo sapiens | 32% id,
75% cov |
hlyA: 3-hydroxy-3-methylglutaryl-coenzyme A lyase/3-methylglutaconyl-coenzyme A hydratase; EC 4.1.3.4; EC 4.2.1.18 from Emericella nidulans | 29% id,
44% cov |
More... |
Shew_2425: multifunctional fatty acid oxidation complex subunit alpha (RefSeq)
is similar to: | PaperBLAST |
BBSH_THAAR / Q9KJE7: (E)-benzylidenesuccinyl-CoA hydratase; EC 4.2.1.180 from Thauera aromatica
bbsH / Q9KJE7: (2S)-2-[(R)-hydroxybenzyl]succinyl-CoA monomer (EC 4.2.1.180) from Thauera aromatica | 33% id,
90% cov |
Q1D5Y4: methylglutaconyl-CoA hydratase (EC 4.2.1.18) from Myxococcus xanthus | 37% id,
79% cov |
Fer4 / Q4PEN0: methylglutaconyl-CoA hydratase (EC 4.2.1.18) from Ustilago maydis | 37% id,
70% cov |
F4JML5: methylglutaconyl-CoA hydratase (EC 4.2.1.18) from Arabidopsis thaliana | 40% id,
64% cov |
AUHM_MOUSE / Q9JLZ3: Methylglutaconyl-CoA hydratase, mitochondrial; 3-MG-CoA hydratase; AU-specific RNA-binding enoyl-CoA hydratase; AU-binding enoyl-CoA hydratase; muAUH; Itaconyl-CoA hydratase; EC 4.2.1.18; EC 4.2.1.56 from Mus musculus | 34% id,
67% cov |
AUHM_HUMAN / Q13825: Methylglutaconyl-CoA hydratase, mitochondrial; 3-MG-CoA hydratase; AU-specific RNA-binding enoyl-CoA hydratase; AU-binding protein/enoyl-CoA hydratase; Itaconyl-CoA hydratase; EC 4.2.1.18; EC 4.2.1.56 from Homo sapiens
AUH / Q13825: methylglutaconyl-CoA hydratase subunit (EC 4.2.1.18) from Homo sapiens
Q13825: methylglutaconyl-CoA hydratase (EC 4.2.1.18) from Homo sapiens | 34% id,
62% cov |
More... |
Shew_0019: multifunctional fatty acid oxidation complex subunit alpha (RefSeq)
is similar to: | PaperBLAST |
Q1D5Y4: methylglutaconyl-CoA hydratase (EC 4.2.1.18) from Myxococcus xanthus | 32% id,
93% cov |
Fer4 / Q4PEN0: methylglutaconyl-CoA hydratase (EC 4.2.1.18) from Ustilago maydis | 36% id,
77% cov |
BBSH_THAAR / Q9KJE7: (E)-benzylidenesuccinyl-CoA hydratase; EC 4.2.1.180 from Thauera aromatica
bbsH / Q9KJE7: (2S)-2-[(R)-hydroxybenzyl]succinyl-CoA monomer (EC 4.2.1.180) from Thauera aromatica | 29% id,
84% cov |
AUHM_MOUSE / Q9JLZ3: Methylglutaconyl-CoA hydratase, mitochondrial; 3-MG-CoA hydratase; AU-specific RNA-binding enoyl-CoA hydratase; AU-binding enoyl-CoA hydratase; muAUH; Itaconyl-CoA hydratase; EC 4.2.1.18; EC 4.2.1.56 from Mus musculus | 36% id,
64% cov |
F4JML5: methylglutaconyl-CoA hydratase (EC 4.2.1.18) from Arabidopsis thaliana | 39% id,
59% cov |
SM_b21126: 3-methylglutaconyl-CoA hydratase (EC 4.2.1.18) from Sinorhizobium meliloti | 25% id,
86% cov |
AUHM_HUMAN / Q13825: Methylglutaconyl-CoA hydratase, mitochondrial; 3-MG-CoA hydratase; AU-specific RNA-binding enoyl-CoA hydratase; AU-binding protein/enoyl-CoA hydratase; Itaconyl-CoA hydratase; EC 4.2.1.18; EC 4.2.1.56 from Homo sapiens
AUH / Q13825: methylglutaconyl-CoA hydratase subunit (EC 4.2.1.18) from Homo sapiens
Q13825: methylglutaconyl-CoA hydratase (EC 4.2.1.18) from Homo sapiens | 36% id,
59% cov |
CA265_RS09125: Methylglutaconyl-CoA hydratase (EC 4.2.1.18) from Pedobacter sp. | 27% id,
68% cov |
More... |
Shew_2864: 3-hydroxyacyl-CoA dehydrogenase, NAD-binding (RefSeq)
is similar to: | PaperBLAST |
Q1D5Y4: methylglutaconyl-CoA hydratase (EC 4.2.1.18) from Myxococcus xanthus | 40% id,
68% cov |
Fer4 / Q4PEN0: methylglutaconyl-CoA hydratase (EC 4.2.1.18) from Ustilago maydis | 37% id,
70% cov |
BBSH_THAAR / Q9KJE7: (E)-benzylidenesuccinyl-CoA hydratase; EC 4.2.1.180 from Thauera aromatica
bbsH / Q9KJE7: (2S)-2-[(R)-hydroxybenzyl]succinyl-CoA monomer (EC 4.2.1.180) from Thauera aromatica | 32% id,
76% cov |
AUHM_MOUSE / Q9JLZ3: Methylglutaconyl-CoA hydratase, mitochondrial; 3-MG-CoA hydratase; AU-specific RNA-binding enoyl-CoA hydratase; AU-binding enoyl-CoA hydratase; muAUH; Itaconyl-CoA hydratase; EC 4.2.1.18; EC 4.2.1.56 from Mus musculus | 39% id,
57% cov |
CA265_RS09125: Methylglutaconyl-CoA hydratase (EC 4.2.1.18) from Pedobacter sp. | 29% id,
78% cov |
F4JML5: methylglutaconyl-CoA hydratase (EC 4.2.1.18) from Arabidopsis thaliana | 34% id,
65% cov |
AUHM_HUMAN / Q13825: Methylglutaconyl-CoA hydratase, mitochondrial; 3-MG-CoA hydratase; AU-specific RNA-binding enoyl-CoA hydratase; AU-binding protein/enoyl-CoA hydratase; Itaconyl-CoA hydratase; EC 4.2.1.18; EC 4.2.1.56 from Homo sapiens
AUH / Q13825: methylglutaconyl-CoA hydratase subunit (EC 4.2.1.18) from Homo sapiens
Q13825: methylglutaconyl-CoA hydratase (EC 4.2.1.18) from Homo sapiens | 39% id,
53% cov |
More... |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 11 reading frames. These were all redundant with annotated proteins.
by Morgan Price,
Arkin group
Lawrence Berkeley National Laboratory