Searching in Shewanella loihica PV-4 (PV4)
Found 22 curated entries in PaperBLAST's database that match '4.2.1.22' as complete word(s).
These curated entries have 16 distinct sequences.
Running ublast with E ≤ 0.01
Found 12 relevant proteins in Shewanella loihica PV-4, or try another query
| Shew_0520: O-succinylhomoserine (thiol)-lyase (RefSeq) is similar to: | PaperBLAST |
CTH / P32929: cystathionine γ-lyase monomer (EC 4.4.1.1; EC 4.4.1.2; EC 4.2.1.22) from Homo sapiens | 45% id, 94% cov |
| Shew_2382: cysteine synthase A (RefSeq) is similar to: | PaperBLAST |
cysK / P56067: cystathionine β-synthase (O-acetyl-L-serine) monomer (EC 4.2.1.22; EC 2.5.1.134; EC 2.5.1.47) from Helicobacter pylori | 41% id, 97% cov |
F9UT54: cysteine synthase (EC 2.5.1.47); cystathionine beta-synthase (EC 4.2.1.22) from Lactiplantibacillus plantarum | 39% id, 96% cov |
Y1077_MYCTU / P9WP51: Probable cystathionine beta-synthase Rv1077; Beta-thionase; Serine sulfhydrase; EC 4.2.1.22 from Mycobacterium tuberculosis | 41% id, 66% cov |
| Shew_2491: methionine gamma-lyase (RefSeq) is similar to: | PaperBLAST |
CTH / P32929: cystathionine γ-lyase monomer (EC 4.4.1.1; EC 4.4.1.2; EC 4.2.1.22) from Homo sapiens | 40% id, 93% cov |
| Shew_1789: cystathionine beta-lyase (RefSeq) is similar to: | PaperBLAST |
CTH / P32929: cystathionine γ-lyase monomer (EC 4.4.1.1; EC 4.4.1.2; EC 4.2.1.22) from Homo sapiens | 34% id, 92% cov |
| Shew_2060: pyridoxal-5'-phosphate-dependent enzyme, beta subunit (RefSeq) is similar to: | PaperBLAST |
F9UT54: cysteine synthase (EC 2.5.1.47); cystathionine beta-synthase (EC 4.2.1.22) from Lactiplantibacillus plantarum | 29% id, 94% cov |
| Shew_2369: cyclic nucleotide-binding protein (RefSeq) is similar to: | PaperBLAST |
Q5SK23: cystathionine beta-synthase (EC 4.2.1.22) from Thermus thermophilus | 24% id, 99% cov |
| Shew_0293: threonine dehydratase (RefSeq) is similar to: | PaperBLAST |
cysK / P56067: cystathionine β-synthase (O-acetyl-L-serine) monomer (EC 4.2.1.22; EC 2.5.1.134; EC 2.5.1.47) from Helicobacter pylori | 23% id, 91% cov |
CBS_RAT / P32232: Cystathionine beta-synthase; Beta-thionase; Hemoprotein H-450; Serine sulfhydrase; EC 4.2.1.22 from Rattus norvegicus | 26% id, 61% cov |
CBS_HUMAN / P35520: Cystathionine beta-synthase; Beta-thionase; Serine sulfhydrase; EC 4.2.1.22 from Homo sapiens | 27% id, 58% cov |
| Shew_0051: cyclic nucleotide-binding protein (RefSeq) is similar to: | PaperBLAST |
Q5SK23: cystathionine beta-synthase (EC 4.2.1.22) from Thermus thermophilus | 22% id, 96% cov |
| Shew_2710: O-acetylhomoserine/O-acetylserine sulfhydrylase (RefSeq) is similar to: | PaperBLAST |
CTH / P32929: cystathionine γ-lyase monomer (EC 4.4.1.1; EC 4.4.1.2; EC 4.2.1.22) from Homo sapiens | 36% id, 50% cov |
CTH / P32929: cystathionine γ-lyase monomer (EC 4.4.1.1; EC 4.4.1.2; EC 4.2.1.22) from Homo sapiens | 36% id, 39% cov |
| Shew_2794: CBS domain-containing protein (RefSeq) is similar to: | PaperBLAST |
Q5SK23: cystathionine beta-synthase (EC 4.2.1.22) from Thermus thermophilus | 36% id, 24% cov |
| Shew_1500: signal transduction protein (RefSeq) is similar to: | PaperBLAST |
Q5SK23: cystathionine beta-synthase (EC 4.2.1.22) from Thermus thermophilus | 33% id, 26% cov |
| Shew_0831: CBS domain-containing protein (RefSeq) is similar to: | PaperBLAST |
Q9VRD9: cystathionine beta-synthase (EC 4.2.1.22) from Drosophila melanogaster | 24% id, 17% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 9 reading frames. These were all redundant with annotated proteins.
Lawrence Berkeley National Laboratory