Searching in Shewanella loihica PV-4 (PV4)
Found 8 curated entries in PaperBLAST's database that match '4.3.1.9' as complete word(s).
These curated entries have 6 distinct sequences.
Running ublast with E ≤ 0.01
Found 3 relevant proteins in Shewanella loihica PV-4, or try another query
| Shew_2028: thioredoxin reductase (RefSeq) is similar to: | PaperBLAST |
GLCAL_PSEFL / Q93HX6: Glucosaminate ammonia-lyase; D-glucosaminate dehydratase alpha-subunit; GlcNA-DH alpha subunit; GlcNADH-alpha; EC 4.3.1.9 from Pseudomonas fluorescens | 71% id, 98% cov |
| Shew_0793: FAD-dependent pyridine nucleotide-disulphide oxidoreductase (RefSeq) is similar to: | PaperBLAST |
GLCAL_PSEFL / Q93HX6: Glucosaminate ammonia-lyase; D-glucosaminate dehydratase alpha-subunit; GlcNA-DH alpha subunit; GlcNADH-alpha; EC 4.3.1.9 from Pseudomonas fluorescens | 33% id, 95% cov |
| Shew_0809: formate dehydrogenase, alpha subunit (RefSeq) is similar to: | PaperBLAST |
GLCAL_PSEFL / Q93HX6: Glucosaminate ammonia-lyase; D-glucosaminate dehydratase alpha-subunit; GlcNA-DH alpha subunit; GlcNADH-alpha; EC 4.3.1.9 from Pseudomonas fluorescens | 25% id, 65% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 3 reading frames. These were all redundant with annotated proteins.
Lawrence Berkeley National Laboratory