Searching in Shewanella loihica PV-4 (PV4)
Found 34 curated entries in PaperBLAST's database that match '5.3.1.8' as complete word(s).
These curated entries have 28 distinct sequences.
Running ublast with E ≤ 0.01
Found 4 relevant proteins in Shewanella loihica PV-4, or try another query
| Shew_2832: phosphoglucosamine mutase (RefSeq) is similar to: | PaperBLAST |
ST0242 / Q976E4: hexose-6-phosphate mutase/isomerase (EC 5.3.1.8; EC 5.3.1.9; EC 5.4.2.10; EC 5.4.2.13) from Sulfurisphaera tokodaii | 29% id, 99% cov |
| Shew_2544: phosphoglucomutase/phosphomannomutase alpha/beta/subunit (RefSeq) is similar to: | PaperBLAST |
ST0242 / Q976E4: hexose-6-phosphate mutase/isomerase (EC 5.3.1.8; EC 5.3.1.9; EC 5.4.2.10; EC 5.4.2.13) from Sulfurisphaera tokodaii | 23% id, 81% cov |
| Shew_1402: glucose-1-phosphate thymidylyltransferase (RefSeq) is similar to: | PaperBLAST |
PH0925 / O58649: GDP-D-mannose pyrophosphorylase (EC 2.7.7.13; EC 5.3.1.8) from Pyrococcus horikoshii | 23% id, 62% cov |
| Shew_0970: XRE family transcriptional regulator (RefSeq) is similar to: | PaperBLAST |
algA / GI|31296823: alginate biosynthesis protein AlgA; EC 2.7.7.13; EC 5.3.1.8 from Pseudomonas fluorescens | 28% id, 18% cov |
ALGA_PSEAE / P07874: Alginate biosynthesis protein AlgA; EC 5.3.1.8; EC 2.7.7.13 from Pseudomonas aeruginosa | 28% id, 14% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 3 reading frames. These were all redundant with annotated proteins.
Lawrence Berkeley National Laboratory