Searching in Shewanella loihica PV-4 (PV4)
Found 7 curated entries in PaperBLAST's database that match '6.2.1.27' as complete word(s).
These curated entries have 4 distinct sequences.
Running ublast with E ≤ 0.01
Found 11 relevant proteins in Shewanella loihica PV-4, or try another query
| Shew_3084: AMP-dependent synthetase and ligase (RefSeq) is similar to: | PaperBLAST |
4HBCL_RHOPA / Q53005: 4-hydroxybenzoate--CoA/benzoate--CoA ligase; 4-hydroxybenzoyl-CoA synthetase; EC 6.2.1.25; EC 6.2.1.27 from Rhodopseudomonas palustris | 27% id, 95% cov |
4CLL6_ARATH / Q84P24: 4-coumarate--CoA ligase-like 6; 4-coumarate--CoA ligase; 4-coumarate--CoA ligase isoform 7; At4CL7; 4-hydroxybenzoate--CoA ligase; EC 6.2.1.-; EC 6.2.1.12; EC 6.2.1.27 from Arabidopsis thaliana | 25% id, 94% cov |
| Shew_2188: long-chain-fatty-acid--CoA ligase (RefSeq) is similar to: | PaperBLAST |
4CLL6_ARATH / Q84P24: 4-coumarate--CoA ligase-like 6; 4-coumarate--CoA ligase; 4-coumarate--CoA ligase isoform 7; At4CL7; 4-hydroxybenzoate--CoA ligase; EC 6.2.1.-; EC 6.2.1.12; EC 6.2.1.27 from Arabidopsis thaliana | 31% id, 85% cov |
3HBCL_THAAR / Q9AJS8: 3-hydroxybenzoate--CoA/4-hydroxybenzoate--CoA ligase; 3-hydroxybenzoyl-CoA synthetase; EC 6.2.1.27; EC 6.2.1.37 from Thauera aromatica | 25% id, 94% cov |
4HBCL_RHOPA / Q53005: 4-hydroxybenzoate--CoA/benzoate--CoA ligase; 4-hydroxybenzoyl-CoA synthetase; EC 6.2.1.25; EC 6.2.1.27 from Rhodopseudomonas palustris | 28% id, 65% cov |
| Shew_1533: acetyl-CoA synthetase (RefSeq) is similar to: | PaperBLAST |
4HBCL_RHOPA / Q53005: 4-hydroxybenzoate--CoA/benzoate--CoA ligase; 4-hydroxybenzoyl-CoA synthetase; EC 6.2.1.25; EC 6.2.1.27 from Rhodopseudomonas palustris | 26% id, 98% cov |
4CLL6_ARATH / Q84P24: 4-coumarate--CoA ligase-like 6; 4-coumarate--CoA ligase; 4-coumarate--CoA ligase isoform 7; At4CL7; 4-hydroxybenzoate--CoA ligase; EC 6.2.1.-; EC 6.2.1.12; EC 6.2.1.27 from Arabidopsis thaliana | 23% id, 96% cov |
3HBCL_THAAR / Q9AJS8: 3-hydroxybenzoate--CoA/4-hydroxybenzoate--CoA ligase; 3-hydroxybenzoyl-CoA synthetase; EC 6.2.1.27; EC 6.2.1.37 from Thauera aromatica | 28% id, 67% cov |
| Shew_2866: acyl-CoA synthetase (RefSeq) is similar to: | PaperBLAST |
3HBCL_THAAR / Q9AJS8: 3-hydroxybenzoate--CoA/4-hydroxybenzoate--CoA ligase; 3-hydroxybenzoyl-CoA synthetase; EC 6.2.1.27; EC 6.2.1.37 from Thauera aromatica | 28% id, 92% cov |
4CLL6_ARATH / Q84P24: 4-coumarate--CoA ligase-like 6; 4-coumarate--CoA ligase; 4-coumarate--CoA ligase isoform 7; At4CL7; 4-hydroxybenzoate--CoA ligase; EC 6.2.1.-; EC 6.2.1.12; EC 6.2.1.27 from Arabidopsis thaliana | 27% id, 92% cov |
Q5P0J2: 4-hydroxybenzoate-CoA ligase (EC 6.2.1.27); 3-hydroxybenzoate-CoA ligase (EC 6.2.1.37) from Azoarcus sp. | 27% id, 70% cov |
| Shew_2673: putative crotonobetaine/carnitine-CoA ligase (RefSeq) is similar to: | PaperBLAST |
3HBCL_THAAR / Q9AJS8: 3-hydroxybenzoate--CoA/4-hydroxybenzoate--CoA ligase; 3-hydroxybenzoyl-CoA synthetase; EC 6.2.1.27; EC 6.2.1.37 from Thauera aromatica | 27% id, 94% cov |
4CLL6_ARATH / Q84P24: 4-coumarate--CoA ligase-like 6; 4-coumarate--CoA ligase; 4-coumarate--CoA ligase isoform 7; At4CL7; 4-hydroxybenzoate--CoA ligase; EC 6.2.1.-; EC 6.2.1.12; EC 6.2.1.27 from Arabidopsis thaliana | 28% id, 89% cov |
Q5P0J2: 4-hydroxybenzoate-CoA ligase (EC 6.2.1.27); 3-hydroxybenzoate-CoA ligase (EC 6.2.1.37) from Azoarcus sp. | 25% id, 96% cov |
| Shew_2593: acyl-CoA synthetase (RefSeq) is similar to: | PaperBLAST |
3HBCL_THAAR / Q9AJS8: 3-hydroxybenzoate--CoA/4-hydroxybenzoate--CoA ligase; 3-hydroxybenzoyl-CoA synthetase; EC 6.2.1.27; EC 6.2.1.37 from Thauera aromatica | 25% id, 100% cov |
4HBCL_RHOPA / Q53005: 4-hydroxybenzoate--CoA/benzoate--CoA ligase; 4-hydroxybenzoyl-CoA synthetase; EC 6.2.1.25; EC 6.2.1.27 from Rhodopseudomonas palustris | 25% id, 93% cov |
Q5P0J2: 4-hydroxybenzoate-CoA ligase (EC 6.2.1.27); 3-hydroxybenzoate-CoA ligase (EC 6.2.1.37) from Azoarcus sp. | 23% id, 18% cov |
| Shew_3502: AMP-dependent synthetase and ligase (RefSeq) is similar to: | PaperBLAST |
Q5P0J2: 4-hydroxybenzoate-CoA ligase (EC 6.2.1.27); 3-hydroxybenzoate-CoA ligase (EC 6.2.1.37) from Azoarcus sp. | 25% id, 92% cov |
| Shew_1715: peptide synthase (RefSeq) is similar to: | PaperBLAST |
3HBCL_THAAR / Q9AJS8: 3-hydroxybenzoate--CoA/4-hydroxybenzoate--CoA ligase; 3-hydroxybenzoyl-CoA synthetase; EC 6.2.1.27; EC 6.2.1.37 from Thauera aromatica | 21% id, 81% cov |
| Shew_3776: AMP-dependent synthetase and ligase (RefSeq) is similar to: | PaperBLAST |
4CLL6_ARATH / Q84P24: 4-coumarate--CoA ligase-like 6; 4-coumarate--CoA ligase; 4-coumarate--CoA ligase isoform 7; At4CL7; 4-hydroxybenzoate--CoA ligase; EC 6.2.1.-; EC 6.2.1.12; EC 6.2.1.27 from Arabidopsis thaliana | 29% id, 41% cov |
3HBCL_THAAR / Q9AJS8: 3-hydroxybenzoate--CoA/4-hydroxybenzoate--CoA ligase; 3-hydroxybenzoyl-CoA synthetase; EC 6.2.1.27; EC 6.2.1.37 from Thauera aromatica | 27% id, 44% cov |
Q5P0J2: 4-hydroxybenzoate-CoA ligase (EC 6.2.1.27); 3-hydroxybenzoate-CoA ligase (EC 6.2.1.37) from Azoarcus sp. | 24% id, 45% cov |
| Shew_2568: AMP-dependent synthetase and ligase (RefSeq) is similar to: | PaperBLAST |
4CLL6_ARATH / Q84P24: 4-coumarate--CoA ligase-like 6; 4-coumarate--CoA ligase; 4-coumarate--CoA ligase isoform 7; At4CL7; 4-hydroxybenzoate--CoA ligase; EC 6.2.1.-; EC 6.2.1.12; EC 6.2.1.27 from Arabidopsis thaliana | 32% id, 35% cov |
| Shew_3514: hypothetical protein (RefSeq) is similar to: | PaperBLAST |
4CLL6_ARATH / Q84P24: 4-coumarate--CoA ligase-like 6; 4-coumarate--CoA ligase; 4-coumarate--CoA ligase isoform 7; At4CL7; 4-hydroxybenzoate--CoA ligase; EC 6.2.1.-; EC 6.2.1.12; EC 6.2.1.27 from Arabidopsis thaliana | 24% id, 27% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 10 reading frames. These were all redundant with annotated proteins.
Lawrence Berkeley National Laboratory