Curated BLAST for Genomes

 

Curated BLAST

Searching in Shewanella loihica PV-4 (PV4)

Found 7 curated entries in PaperBLAST's database that match 'acetohydroxy-acid synthase%small' as complete word(s).

These curated entries have 7 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Shewanella loihica PV-4, or try another query

Shew_1775: acetolactate synthase 3 regulatory subunit (RefSeq)
is similar to:
PaperBLAST

ilvN / O08354: acetohydroxy-acid synthase small subunit (EC 2.2.1.6) from Methanococcus aeolicus

43% id,
96% cov

ILVH_MYCTU / P9WKJ3: Putative acetolactate synthase small subunit; Acetohydroxy-acid synthase small subunit; AHAS; ALS; EC 2.2.1.6 from Mycobacterium tuberculosis

41% id,
93% cov

ILV6_SCHPO / O60086: Probable acetolactate synthase small subunit; Acetohydroxy-acid synthase small subunit; AHAS; ALS from Schizosaccharomyces pombe

31% id,
55% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory