Searching in Shewanella loihica PV-4 (PV4)
Found 4 curated entries in PaperBLAST's database that match 'carbamoyl-phosphate synthase%large' as complete word(s).
These curated entries have 4 distinct sequences.
Running ublast with E ≤ 0.01
Found 3 relevant proteins in Shewanella loihica PV-4, or try another query
| Shew_2838: carbamoyl phosphate synthase large subunit (RefSeq) is similar to: | PaperBLAST |
CARB_ARATH / Q42601: Carbamoyl-phosphate synthase large chain, chloroplastic; Carbamoyl-phosphate synthetase ammonia chain; Protein VENOSA 3; EC 6.3.5.5 from Arabidopsis thaliana | 56% id, 91% cov |
CARB_BACSU / P25994: Carbamoyl-phosphate synthase pyrimidine-specific large chain; Carbamoyl-phosphate synthetase ammonia chain; EC 6.3.5.5 from Bacillus subtilis | 50% id, 100% cov |
carB / CAB56843.1: carbamoyl-phosphate synthase large subunit from Lactobacillus plantarum | 47% id, 90% cov |
| Shew_3218: carbamoyl-phosphate synthase L chain, ATP-binding (RefSeq) is similar to: | PaperBLAST |
CARB_BACSU / P25994: Carbamoyl-phosphate synthase pyrimidine-specific large chain; Carbamoyl-phosphate synthetase ammonia chain; EC 6.3.5.5 from Bacillus subtilis | 23% id, 28% cov |
| Shew_3365: acetyl-CoA carboxylase, biotin carboxylase (RefSeq) is similar to: | PaperBLAST |
CARB_BACSU / P25994: Carbamoyl-phosphate synthase pyrimidine-specific large chain; Carbamoyl-phosphate synthetase ammonia chain; EC 6.3.5.5 from Bacillus subtilis | 22% id, 27% cov |
CARB_ARATH / Q42601: Carbamoyl-phosphate synthase large chain, chloroplastic; Carbamoyl-phosphate synthetase ammonia chain; Protein VENOSA 3; EC 6.3.5.5 from Arabidopsis thaliana | 22% id, 25% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 3 reading frames. These were all redundant with annotated proteins.
Lawrence Berkeley National Laboratory